Pavir.Cb00833 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Cb00833 T050722_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Cb00833.1.p bHLH 233 280

Links

Other bHLH family TFs
Other Panicum virgatum TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PDK_20s1464821g001 Phoenix dactylifera PDK_20s1464821g001 I 0.863
AMTR_s00009p00242790 Amborella trichopoda AMTR_s00009p00242790 I 0.875
PGSC0003DMG402030621 Solanum tuberosum PGSC0003DMG402030621 I 0.843
POPTR_0006s13790 Populus trichocarpa POPTR_0006s13790 I 0.842
Sb06g025040 Sorghum bicolor Sb06g025040 I 0.888
Sb06g025060 Sorghum bicolor Sb06g025060 I 0.888
Si000845m.g Setaria italica Si000845m.g I 0.888
Si012401m.g Setaria italica Si012401m.g I 0.888
LPERR04G17400 Leersia perrieri LPERR04G17400 I 0.888
TCM_037645 Theobroma cacao TCM_037645 I 0.839
GSMUA_Achr9G18080_001 Musa acuminata GSMUA_Achr9G18080_001 I 0.859
GSMUA_Achr3G10120_001 Musa acuminata GSMUA_Achr3G10120_001 I 0.859
GSMUA_Achr11G21270_001 Musa acuminata GSMUA_Achr11G21270_001 I 0.890
GRMZM2G172795 Zea mays GRMZM2G172795 I 0.888
SapurV1A.0249s0140 Salix purpurea SapurV1A.0249s0140 I 0.842
Gorai.001G012400 Gossypium raimondii Gorai.001G012400 I 0.839
cassava8594.m1 Manihot esculenta cassava8594.m1 I 0.851
29739.m003684 Ricinus communis 29739.m003684 I 0.842
F775_11347 Aegilops tauschii F775_11347 I 0.877
F775_14190 Aegilops tauschii F775_14190 I 0.877
GLYMA03G30940 Glycine max GLYMA03G30940 I 0.838
OMERI01G18770 Oryza meridionalis OMERI01G18770 N 0.912
OPUNC04G19040 Oryza punctata OPUNC04G19040 N 0.912
OPUNC04G19030 Oryza punctata OPUNC04G19030 N 0.912
ONIVA04G19860 Oryza nivara ONIVA04G19860 N 0.912
ORGLA04G0183800 Oryza glaberrima ORGLA04G0183800 N 0.912
ORGLA04G0183900 Oryza glaberrima ORGLA04G0183900 N 0.912
ORGLA11G0077500 Oryza glaberrima ORGLA11G0077500 N 0.912
ONIVA04G19650 Oryza nivara ONIVA04G19650 N 0.912
ORUFI01G23050 Oryza rufipogon ORUFI01G23050 N 0.912
ORUFI04G22890 Oryza rufipogon ORUFI04G22890 N 0.912
ORUFI04G22910 Oryza rufipogon ORUFI04G22910 N 0.912
ORUFI11G09150 Oryza rufipogon ORUFI11G09150 N 0.912
OS04G0557200 Oryza sativa OS04G0557200 N 0.912
OS04G0557800 Oryza sativa OS04G0557800 N 0.899
Pavir.J34298 Panicum virgatum Pavir.J34298 N 0.875
Sb06g025020 Sorghum bicolor Sb06g025020 N 0.859
Pavir.Gb01093 Panicum virgatum Pavir.Gb01093 N 0.854
Traes_2AL_4F71A8FB4 Triticum aestivum Traes_2AL_4F71A8FB4 N 0.912
TRIUR3_35186 Triticum urartu TRIUR3_35186 N 0.899
Traes_2DL_099D4CA9B Triticum aestivum Traes_2DL_099D4CA9B N 0.856
TRIUR3_26157 Triticum urartu TRIUR3_26157 N 0.912
TRIUR3_18279 Triticum urartu TRIUR3_18279 N 0.912
F775_18830 Aegilops tauschii F775_18830 N 0.899
OB01G30110 Oryza brachyantha OB01G30110 N 0.914
MLOC_38470 Hordeum vulgare MLOC_38470 N 0.912
LPERR08G11070 Leersia perrieri LPERR08G11070 N 0.901
LPERR04G17390 Leersia perrieri LPERR04G17390 N 0.887
LPERR04G17380 Leersia perrieri LPERR04G17380 N 0.899
GSMUA_Achr5G20600_001 Musa acuminata GSMUA_Achr5G20600_001 N 0.890
GRMZM5G822829 Zea mays GRMZM5G822829 N 0.863
F775_19744 Aegilops tauschii F775_19744 N 0.899
OB02G27530 Oryza brachyantha OB02G27530 N 0.854
F775_10624 Aegilops tauschii F775_10624 N 0.912
BGIOSGA015472 Oryza indica BGIOSGA015472 N 0.912
BGIOSGA014567 Oryza indica BGIOSGA014567 N 0.912
BGIOSGA014566 Oryza indica BGIOSGA014566 N 0.912
BGIOSGA014565 Oryza indica BGIOSGA014565 N 0.912
BGIOSGA003821 Oryza indica BGIOSGA003821 N 0.912
BGIOSGA003819 Oryza indica BGIOSGA003819 N 0.912
OGLUM04G21260 Oryza glumaepatula OGLUM04G21260 N 0.912
ONIVA01G22920 Oryza nivara ONIVA01G22920 N 0.877
OMERI04G17820 Oryza meridionalis OMERI04G17820 N 0.912
OMERI04G17790 Oryza meridionalis OMERI04G17790 N 0.912
OMERI01G18860 Oryza meridionalis OMERI01G18860 N 0.891
OLONG_016960 Oryza longistaminata OLONG_016960 N 0.912
OLONG_016958 Oryza longistaminata OLONG_016958 N 0.912
OLONG_009946 Oryza longistaminata OLONG_009946 N 0.912
OGLUM04G21350 Oryza glumaepatula OGLUM04G21350 N 0.912
ONIVA01G22980 Oryza nivara ONIVA01G22980 N 0.912
OGLUM01G23970 Oryza glumaepatula OGLUM01G23970 N 0.912
OBART04G21370 Oryza barthii OBART04G21370 N 0.912
OBART04G21320 Oryza barthii OBART04G21320 N 0.912
OBART01G20350 Oryza barthii OBART01G20350 N 0.912
OB04G28390 Oryza brachyantha OB04G28390 N 0.912
OB04G28380 Oryza brachyantha OB04G28380 N 0.912
OB04G28350 Oryza brachyantha OB04G28350 N 0.912