Pavir.J18412 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J18412 T050898_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J18412.1.p bHLH 460 509

Links

Other bHLH family TFs
Other Panicum virgatum TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10030106m.g Citrus clementina Ciclev10030106m.g N 0.864
Pm005302 Prunus mume Pm005302 N 0.881
Pm021290 Prunus mume Pm021290 N 0.890
29801.m003163 Ricinus communis 29801.m003163 N 0.890
30170.m013700 Ricinus communis 30170.m013700 N 0.883
cassava46929.m1 Manihot esculenta cassava46929.m1 N 0.879
cassava47360.m1 Manihot esculenta cassava47360.m1 N 0.879
Aquca_007_00701 Aquilegia coerulea Aquca_007_00701 N 0.855
Bostr.26675s0191 Boechera stricta Bostr.26675s0191 N 0.894
Cagra.2481s0020 Capsella grandiflora Cagra.2481s0020 N 0.894
Carubv10011964m.g Capsella rubella Carubv10011964m.g N 0.894
Ciclev10003973m.g Citrus clementina Ciclev10003973m.g N 0.860
Ca_16375 Cicer arietinum Ca_16375 N 0.848
Eucgr.G01493 Eucalyptus grandis Eucgr.G01493 N 0.884
gene24577-v1.0-hybrid Fragaria vesca gene24577-v1.0-hybrid N 0.914
Gorai.002G135000 Gossypium raimondii Gorai.002G135000 N 0.890
Gorai.013G045100 Gossypium raimondii Gorai.013G045100 N 0.884
MDP0000484847 Malus domestica MDP0000484847 N 0.883
MDP0000713910 Malus domestica MDP0000713910 N 0.873
orange1.1g037241m.g Citrus sinensis orange1.1g037241m.g N 0.864
orange1.1g038084m.g Citrus sinensis orange1.1g038084m.g N 0.860
SapurV1A.0005s1150 Salix purpurea SapurV1A.0005s1150 N 0.870
SapurV1A.0643s0100 Salix purpurea SapurV1A.0643s0100 N 0.859
Thhalv10012185m.g Eutrema salsugineum Thhalv10012185m.g N 0.894
RGE1 Populus trichocarpa POPTR_0001s31250 N 0.859
BHLH95 Arabidopsis thaliana AT1G49770 N 0.894
Bo5g076460 Brassica oleracea Bo5g076460 N 0.894
Bo6g018390 Brassica oleracea Bo6g018390 N 0.894
Bra018796 Brassica rapa Bra018796 N 0.894
Bra040671 Brassica rapa Bra040671 N 0.894
RGE1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003696 N 0.894
GLYMA02G11500 Glycine max GLYMA02G11500 N 0.884
GRMZM2G147685 Zea mays GRMZM2G147685 N 0.856
GSMUA_Achr9G08780_001 Musa acuminata GSMUA_Achr9G08780_001 N 0.890
MTR_4g085660 Medicago truncatula MTR_4g085660 N 0.851
MTR_4g085700 Medicago truncatula MTR_4g085700 N 0.863
AMTR_s00017p00226990 Amborella trichopoda AMTR_s00017p00226990 N 0.870
POPTR_0014s02600 Populus trichocarpa POPTR_0014s02600 N 0.864
PRUPE_ppa018148mg Prunus persica PRUPE_ppa018148mg N 0.894
PRUPE_ppa022683mg Prunus persica PRUPE_ppa022683mg N 0.890
SELMODRAFT_424152 Selaginella moellendorffii SELMODRAFT_424152 N 0.852
SELMODRAFT_446556 Selaginella moellendorffii SELMODRAFT_446556 N 0.852
Si009419m.g Setaria italica Si009419m.g N 0.871
TCM_007083 Theobroma cacao TCM_007083 N 0.890
TCM_033803 Theobroma cacao TCM_033803 N 0.890
RGE1 Vitis vinifera VIT_03s0063g00170 N 0.890
VIT_18s0001g10300 Vitis vinifera VIT_18s0001g10300 N 0.890
Ca_06466 Cicer arietinum Ca_06466 N 0.869