Pavir.J39793 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J39793 T050951_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J39793.1.p bHLH 14 55

Links

Other bHLH family TFs
Other Panicum virgatum TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb04g027930 Sorghum bicolor Sb04g027930 N 0.719
ONIVA06G09300 Oryza nivara ONIVA06G09300 N 0.890
OPUNC02G30020 Oryza punctata OPUNC02G30020 N 0.860
OPUNC06G07810 Oryza punctata OPUNC06G07810 N 0.890
ORGLA02G0280200 Oryza glaberrima ORGLA02G0280200 N 0.860
ORGLA06G0076300 Oryza glaberrima ORGLA06G0076300 N 0.890
ORUFI02G34170 Oryza rufipogon ORUFI02G34170 N 0.860
ILI5 Oryza sativa OS02G0747900 N 0.860
ILI4 Oryza sativa OS06G0226500 N 0.890
ONIVA06G04530 Oryza nivara ONIVA06G04530 N 0.860
Sb10g008000 Sorghum bicolor Sb10g008000 N 0.877
Si007662m.g Setaria italica Si007662m.g N 0.890
Traes_6DL_3F9FA4887 Triticum aestivum Traes_6DL_3F9FA4887 N 0.847
TRIUR3_29197 Triticum urartu TRIUR3_29197 N 0.848
Pavir.Ab02945 Panicum virgatum Pavir.Ab02945 N 0.914
Pavir.Db01746 Panicum virgatum Pavir.Db01746 N 0.878
Pavir.J09493 Panicum virgatum Pavir.J09493 N 0.877
ILI5 Oryza indica BGIOSGA005623 N 0.860
OMERI06G09660 Oryza meridionalis OMERI06G09660 N 0.890
OMERI02G31120 Oryza meridionalis OMERI02G31120 N 0.860
OLONG_003198 Oryza longistaminata OLONG_003198 N 0.860
OGLUM02G33100 Oryza glumaepatula OGLUM02G33100 N 0.860
OBART02G32470 Oryza barthii OBART02G32470 N 0.860
OB06G17570 Oryza brachyantha OB06G17570 N 0.890
OB02G39450 Oryza brachyantha OB02G39450 N 0.857
MLOC_55094 Hordeum vulgare MLOC_55094 N 0.860
LPERR06G07460 Leersia perrieri LPERR06G07460 N 0.890
LPERR02G26590 Leersia perrieri LPERR02G26590 N 0.860
GRMZM2G036092 Zea mays GRMZM2G036092 N 0.914
F775_27240 Aegilops tauschii F775_27240 N 0.847
BRADI3G59290 Brachypodium distachyon BRADI3G59290 N 0.860
BRADI1G45260 Brachypodium distachyon BRADI1G45260 N 0.860
ILI4 Oryza indica BGIOSGA022576 N 0.890