AAY99628 (Xenopus tropicalis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 AAY99628 T051335_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROD1
M04148_2.00 		Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY		 SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX 		0.914 1.000
NEUROD1
M08057_2.00 		Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN		 ChIP-seq
Mathelier et al.(2014)
MA1109.1 		0.914 1.000
NEUROD1
M08735_2.00 		Homo sapiens
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A 		0.914 1.000
Neurod1
M08764_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A 		0.914 1.000
Neurod1
M09474_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298 		0.914 1.000
NEUROD1
M09873_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_01 		0.914 1.000
NEUROD1
M09874_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_02 		0.914 1.000
NEUROD1
M04149_2.00 		Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY		 SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX 		0.914 1.000
NEUROD2
M02795_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Jolma et al.(2013)
NEUROD2_1 		0.879 0.962
NEUROD2
M04160_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX 		0.879 0.962
NEUROD2
M08737_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B 		0.879 0.962
Neurod2
M08770_2.00 		Mus musculus
RVCAGATGGB
VCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A 		0.879 0.962
NEUROD2
M04161_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX 		0.879 0.962
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAY99628 bHLH 109 161

Links

Other bHLH family TFs
Other Xenopus tropicalis TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nRc.2.0.1.g11083 Romanomermis culicivorax nRc.2.0.1.g11083 N
L596_g21289 Steinernema carpocapsae L596_g21289 N
L889_g7644 Steinernema feltiae L889_g7644 N
L892_g27191 Steinernema scapterisci L892_g27191 N
L893_g33137 Steinernema glaseri L893_g33137 N
L898_g24378 Steinernema monticolum L898_g24378 N
MhA1_Contig123.frz3.gene102 Meloidogyne hapla MhA1_Contig123.frz3.gene102 N
nAv.1.0.1.g02714 Acanthocheilonema viteae nAv.1.0.1.g02714 N
NBR_0001408501 Nippostrongylus brasiliensis NBR_0001408501 N
nDi.2.2.2.g01364 Dirofilaria immitis nDi.2.2.2.g01364 N
NECAME_01427 Necator americanus NECAME_01427 N
nLs.2.1.2.g03389 Litomosoides sigmodontis nLs.2.1.2.g03389 N
nOo.2.0.1.g07016 Onchocerca ochengi nOo.2.0.1.g07016 N
HPLM_0001420401 Haemonchus placei HPLM_0001420401 N
OESDEN_00417 Oesophagostomum dentatum OESDEN_00417 N
OFLC_0000335001 Onchocerca flexuosa OFLC_0000335001 N
PTRK_0000871700 Parastrongyloides trichosuri PTRK_0000871700 N
RSKR_0000723700 Rhabditophanes kr3021 RSKR_0000723700 N
SPAL_0000484600 Strongyloides papillosus SPAL_0000484600 N
SSTP_0000565500 Strongyloides stercoralis SSTP_0000565500 N
SVE_0167700 Strongyloides venezuelensis SVE_0167700 N
TCLT_0000380801 Thelazia callipaeda TCLT_0000380801 N
TCNE_0001271001 Toxocara canis TCNE_0001271001 N
TELCIR_14024 Teladorsagia circumcincta TELCIR_14024 N
TTRE_0000251601 Trichuris trichiura TTRE_0000251601 N
ANCCAN_24904 Ancylostoma caninum ANCCAN_24904 N
CBN20344 Caenorhabditis brenneri CBN20344 N
CBN21788 Caenorhabditis brenneri CBN21788 N
CJA09659 Caenorhabditis japonica CJA09659 N
EFV53021 Trichinella spiralis EFV53021 N
LOAG_08661 Loa loa LOAG_08661 N
aha-1 Caenorhabditis elegans WBGene00000095 N
WBGene00237491 Onchocerca volvulus WBGene00237491 N
Minc05207 Meloidogyne incognita Minc05207 N
Minc15071 Meloidogyne incognita Minc15071 N
ACAC_0000261401 Angiostrongylus cantonensis ACAC_0000261401 N
ACOC_0000445401 Angiostrongylus costaricensis ACOC_0000445401 N
ALUE_0000466001 Ascaris lumbricoides ALUE_0000466001 N
Bm2359 Brugia malayi Bm2359 N
ANCCEY_13945 Ancylostoma ceylanicum ANCCEY_13945 N
ANCDUO_07053 Ancylostoma duodenale ANCDUO_07053 N
ASIM_0001352101 Anisakis simplex ASIM_0001352101 N
ASU_08380 Ascaris suum ASU_08380 N
D917_07015 Trichinella nativa D917_07015 N
D918_05776 Trichuris suis D918_05776 N
DICVIV_02602 Dictyocaulus viviparus DICVIV_02602 N
DME_0000607201 Dracunculus medinensis DME_0000607201 N
EVEC_0000439301 Enterobius vermicularis EVEC_0000439301 N
GPUH_0001856701 Gongylonema pulchrum GPUH_0001856701 N
HCOI00027700 Haemonchus contortus HCOI00027700 N