SNAPOd2T00001991001 (Oikopleura dioica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 SNAPOd2T00001991001 T051731_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Clock
M01735_2.00 		Mus musculus
NNCAYRTGNN
NNCAYRTGNN		 PBM
Weirauch et al.(2014)
pTH5056 		0.838 0.667
CLOCK
M02789_2.00 		Homo sapiens
DACACGTGYH
DRCACGTGTH		 SELEX
Jolma et al.(2013)
CLOCK_1 		0.838 0.667
CLOCK
M04129_2.00 		Homo sapiens
NMCACGTGYN
NRCACGTGKN		 SELEX
Yin et al.(2017)
CLOCK_eDBD_HT-SELEX 		0.838 0.667
CLOCK
M08728_2.00 		Homo sapiens
DBBBCAYKTGNNHB
VDNNCAMRTGVVVH		 Misc
Kulakovskiy et al.(2013)
CLOCK_HUMAN.H11MO.0.C 		0.838 0.667
Clock
M08760_2.00 		Mus musculus
DBBBCAYKTGNNHB
VDNNCAMRTGVVVH		 Misc
Kulakovskiy et al.(2013)
CLOCK_MOUSE.H11MO.0.C 		0.838 0.667
Clock
M09473_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Clock_GSE39860 		0.838 0.667
CLOCK
M09849_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CLOCK_Q6 		0.838 0.667
CLOCK
M04130_2.00 		Homo sapiens
NRCRCRTGBH
DVCAYGYGYN		 SELEX
Yin et al.(2017)
CLOCK_eDBD_Methyl-HT-SELEX 		0.838 0.667
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SNAPOd2T00001991001 bHLH 48 98

Links

Other bHLH family TFs
Other Oikopleura dioica TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSTBEG00000012133 Tupaia belangeri ENSTBEG00000012133 N
ENSOARG00000003358 Ovis aries ENSOARG00000003358 N
TRERF1 Otolemur garnettii ENSOGAG00000025610 N
ENSPANG00000009451 Papio anubis ENSPANG00000009451 N
ENSPPYG00000016614 Pongo abelii ENSPPYG00000016614 N
ENSPSIG00000009755 Pelodiscus sinensis ENSPSIG00000009755 N
TRERF1 Pteropus vampyrus ENSPVAG00000007626 N
Trerf1 Rattus norvegicus ENSRNOG00000022598 N
ENSSHAG00000004599 Sarcophilus harrisii ENSSHAG00000004599 N
TRERF1 Sus scrofa ENSSSCG00000001639 N
ENSSTOG00000022996 Ictidomys tridecemlineatus ENSSTOG00000022996 N
TRERF1 Ornithorhynchus anatinus ENSOANG00000008467 N
TRERF1 Taeniopygia guttata ENSTGUG00000003250 N
ENSTSYG00000003874 Tarsius syrichta ENSTSYG00000003874 N
TRERF1 Tursiops truncatus ENSTTRG00000014065 N
Aan_R011464 Calypte anna Aan_R011464 N
Cmyd_10010458 Chelonia mydas Cmyd_10010458 N
ENSBTAP00000020376-D1 Bos grunniens ENSBTAP00000020376-D1 N
Myotis_brandtii_Trerf1_10015386 Myotis brandtii Myotis_brandtii_Trerf1_10015386 N
Ogr07462 Ophisaurus gracilis Ogr07462 N
trerf1 Xenopus tropicalis XB-GENE-940630 N
TRERF1 Gallus gallus ENSGALG00000009896 N
ENSAPLG00000014876 Anas platyrhynchos ENSAPLG00000014876 N
TRERF1 Bos taurus ENSBTAG00000015321 N
TRERF1 Canis familiaris ENSCAFG00000001642 N
TRERF1 Choloepus hoffmanni ENSCHOG00000006120 N
TRERF1 Callithrix jacchus ENSCJAG00000004347 N
TRERF1 Cavia porcellus ENSCPOG00000015717 N
TRERF1 Equus caballus ENSECAG00000016971 N
ENSFALG00000012590 Ficedula albicollis ENSFALG00000012590 N
TRERF1 Felis catus ENSFCAG00000011210 N
TRERF1 Homo sapiens ENSG00000124496 N
TRERF1 Anolis carolinensis ENSACAG00000001080 N
TRERF1 Gorilla gorilla ENSGGOG00000012813 N
ENSLACG00000008926 Latimeria chalumnae ENSLACG00000008926 N
TRERF1 Loxodonta africana ENSLAFG00000007825 N
ENSLOCG00000017240 Lepisosteus oculatus ENSLOCG00000017240 N
TRERF1 Meleagris gallopavo ENSMGAG00000013894 N
TRERF1 Myotis lucifugus ENSMLUG00000016748 N
TRERF1 Monodelphis domestica ENSMODG00000019042 N
ENSMPUG00000013360 Mustela putorius furo ENSMPUG00000013360 N
ENSNLEG00000004772 Nomascus leucogenys ENSNLEG00000004772 N