Trerf1 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000022598 T109102_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000032697 C2H2 ZF 518 540
ENSRNOP00000032697 C2H2 ZF 935 959
ENSRNOP00000032697 C2H2 ZF 1008 1030
ENSRNOP00000072249 C2H2 ZF 518 540
ENSRNOP00000072249 C2H2 ZF 1044 1068
ENSRNOP00000072249 C2H2 ZF 1117 1139

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRERF1 Bos taurus ENSBTAG00000015321 N 1.000
TRERF1 Canis familiaris ENSCAFG00000001642 N 1.000
TRERF1 Choloepus hoffmanni ENSCHOG00000006120 N 1.000
TRERF1 Equus caballus ENSECAG00000016971 N 1.000
TRERF1 Felis catus ENSFCAG00000011210 N 1.000
TRERF1 Loxodonta africana ENSLAFG00000007825 N 1.000
ENSMPUG00000013360 Mustela putorius furo ENSMPUG00000013360 N 1.000
ENSOARG00000003358 Ovis aries ENSOARG00000003358 N 1.000
TRERF1 Pteropus vampyrus ENSPVAG00000007626 N 1.000
TRERF1 Sus scrofa ENSSSCG00000001639 N 1.000
ENSTBEG00000012133 Tupaia belangeri ENSTBEG00000012133 N 1.000
ENSBTAP00000020376-D1 Bos grunniens ENSBTAP00000020376-D1 N 1.000
TRERF1 Callithrix jacchus ENSCJAG00000004347 N 0.991
TRERF1 Homo sapiens ENSG00000124496 N 0.991
TRERF1 Gorilla gorilla ENSGGOG00000012813 N 0.991
TRERF1 Myotis lucifugus ENSMLUG00000016748 N 0.991
ENSNLEG00000004772 Nomascus leucogenys ENSNLEG00000004772 N 0.991
TRERF1 Otolemur garnettii ENSOGAG00000025610 N 0.991
ENSPANG00000009451 Papio anubis ENSPANG00000009451 N 0.991
ENSSTOG00000022996 Ictidomys tridecemlineatus ENSSTOG00000022996 N 0.991
TRERF1 Tursiops truncatus ENSTTRG00000014065 N 0.991
Myotis_brandtii_Trerf1_10015386 Myotis brandtii Myotis_brandtii_Trerf1_10015386 N 0.991
TRERF1 Monodelphis domestica ENSMODG00000019042 N 0.983
ENSSHAG00000004599 Sarcophilus harrisii ENSSHAG00000004599 N 0.983
ENSTSYG00000003874 Tarsius syrichta ENSTSYG00000003874 N 0.983
TRERF1 Cavia porcellus ENSCPOG00000015717 N 0.974
TRERF1 Ornithorhynchus anatinus ENSOANG00000008467 N 0.974
ENSPPYG00000016614 Pongo abelii ENSPPYG00000016614 N 0.974
ENSPSIG00000009755 Pelodiscus sinensis ENSPSIG00000009755 N 0.957
ENSAPLG00000014876 Anas platyrhynchos ENSAPLG00000014876 N 0.948
TRERF1 Taeniopygia guttata ENSTGUG00000003250 N 0.939
ENSFALG00000012590 Ficedula albicollis ENSFALG00000012590 N 0.930
TRERF1 Meleagris gallopavo ENSMGAG00000013894 N 0.930
TRERF1 Gallus gallus ENSGALG00000009896 N 0.922
ENSLACG00000008926 Latimeria chalumnae ENSLACG00000008926 N 0.922
Aan_R011464 Calypte anna Aan_R011464 N 0.922
Pvit_13408 Pogona vitticeps Pvit_13408 N 0.887
TRERF1 Anolis carolinensis ENSACAG00000001080 N 0.878
ENSLOCG00000017240 Lepisosteus oculatus ENSLOCG00000017240 N 0.843
trerf1 Xenopus tropicalis XB-GENE-940630 N 0.835
ENSP00000362013 Macaca fascicularis ENSP00000362013 N 0.800
Cmyd_10010458 Chelonia mydas Cmyd_10010458 N 0.765
Alligator_sinensis_CCG016667.1 Alligator sinensis Alligator_sinensis_CCG016667.1 N 0.739
Ogr07462 Ophisaurus gracilis Ogr07462 N 0.730