CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf08683-snap-gene-0.4
(
Meloidogyne floridensis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
maker-nMf.1.1.scaf08683-snap-gene-0.4
T054396_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf08683-snap-gene-0.4-mRNA-1
bHLH
90
145
RRNANNTRERIRVRDINAAFKELARLCCSHMPNLEERNLTKLNTLLKAVELIPMLE
Links
Other
bHLH
family TFs
Other
Meloidogyne floridensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
REM1
Arabidopsis thaliana
AT4G31610
D
REM1
Arabidopsis lyrata
fgenesh2_kg.7__1010__AT4G31610.1
I
Bostr.7867s1015
Boechera stricta
Bostr.7867s1015
I
Cagra.3807s0032
Capsella grandiflora
Cagra.3807s0032
I
Carubv10006696m.g
Capsella rubella
Carubv10006696m.g
I