Carubv10006696m.g (Capsella rubella)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Carubv10006696m.g T022842_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REM1
M00853_2.00 		Arabidopsis thaliana
WGDTGTAGN
NCTACAHCW		 PBM
Franco-Zorrilla et al.(2014)
REM1 		0.758 0.758
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10006696m B3 17 92
Carubv10006696m B3 154 249
Carubv10006696m B3 275 375

Links

Other B3 family TFs
Other Capsella rubella TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.3807s0032 Capsella grandiflora Cagra.3807s0032 I 0.963
Bostr.7867s1015 Boechera stricta Bostr.7867s1015 I 0.866
REM1 Arabidopsis thaliana AT4G31610 D 0.764
REM1 Arabidopsis lyrata fgenesh2_kg.7__1010__AT4G31610.1 I 0.747