Bo1g005460 (Brassica oleracea)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bo1g005460 T057241_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GBF1
M01783_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Weirauch et al.(2014)
pTH7259 		0.876 0.875
GBF1
M09913_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_01 		0.876 0.875
GBF1
M09914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1F_Q2 		0.876 0.875
GBF1
M09915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2_01 		0.876 0.875
GBF1
M09916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2 		0.876 0.875
TAF1_TOBAC
M10079_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_01 		0.840 0.672
TAF1_TOBAC
M10080_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_Q2 		0.840 0.672
BZIP68
M01770_2.00 		Arabidopsis thaliana
BMCASGBND
HNVCSTGKV		 PBM
Weirauch et al.(2014)
pTH8192 		0.835 0.656
BZIP68
M06752_2.00 		Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH		 Dap-seq
OMalley et al.(2016)
bZIP68_col_a 		0.835 0.656
Q40645_ORYSA
M10050_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OSBZ8_Q6 		0.833 0.625
Q41109_PHAVU
M10078_2.00 		Phaseolus vulgaris Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ROM_Q2 		0.833 0.625
BZIP16
M06764_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a 		0.830 0.656
BZIP16
M06765_2.00 		Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a 		0.830 0.656
PK09653.1
M01156_2.00 		Cannabis sativa
NNMCASVNNN
NNNBSTGKNN		 PBM
Lambert et al.(2019)
pTH10114 		0.822 0.672
PK23964.1
M01160_2.00 		Cannabis sativa
DNKMCACGTV
BACGTGKMNH		 PBM
Lambert et al.(2019)
pTH10151 		0.820 0.641
EmBP-1
M02659_2.00 		Triticum aestivum
CCACGTSW
WSACGTGG		 SELEX
Mathelier et al.(2014)
MA0128.1 		0.817 0.625
EMBP1_WHEAT
M09921_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EMBP1_02 		0.817 0.625
EMBP1_WHEAT
M09922_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EMBP1_Q2 		0.817 0.625
GBF2
M01781_2.00 		Arabidopsis thaliana
BMCASSNNN
NNNSSTGKV		 PBM
Weirauch et al.(2014)
pTH7258 		0.817 0.641
GBF3
M01779_2.00 		Arabidopsis thaliana
NBMCASSTVD
HBASSTGKVN		 PBM
Weirauch et al.(2014)
pTH7328 		0.813 0.641
GBF3
M06770_2.00 		Arabidopsis thaliana
DNHDNHSACGTGKMD
HKMCACGTSDNHDNH		 Dap-seq
OMalley et al.(2016)
GBF3_colamp 		0.813 0.641
GBF3
M06771_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
GBF3_col 		0.813 0.641
CPRF1_PETCR
M10066_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_01 		0.798 0.625
CPRF1_PETCR
M10067_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_Q2 		0.798 0.625
CPRF1_PETCR
M10068_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF_Q2 		0.798 0.625
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g005460.1 bZIP 218 281

Links

Other bZIP family TFs
Other Brassica oleracea TFs

317 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27751.m000169 Ricinus communis 27751.m000169 N
Thhalv10006491m.g Eutrema salsugineum Thhalv10006491m.g N
SapurV1A.0196s0430 Salix purpurea SapurV1A.0196s0430 N
SapurV1A.0159s0010 Salix purpurea SapurV1A.0159s0010 N
orange1.1g025477m.g Citrus sinensis orange1.1g025477m.g N
MDP0000641681 Malus domestica MDP0000641681 N
Gorai.009G073100 Gossypium raimondii Gorai.009G073100 N
gene27422-v1.0-hybrid Fragaria vesca gene27422-v1.0-hybrid N
Ciclev10006413m.g Citrus clementina Ciclev10006413m.g N
Carubv10017770m.g Capsella rubella Carubv10017770m.g N
Cagra.0578s0028 Capsella grandiflora Cagra.0578s0028 N
Bostr.20505s0055 Boechera stricta Bostr.20505s0055 N
mgf023366m Mimulus guttatus mgf023366m N
mgf015618m Mimulus guttatus mgf015618m N
Cucsa.371810 Cucumis sativus Cucsa.371810 N
BHLH039 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001751 N
Pm031098 Prunus mume Pm031098 N
Cla001676 Citrullus lanatus Cla001676 N
Ca_23621 Cicer arietinum Ca_23621 N
TCM_040699 Theobroma cacao TCM_040699 N
TCM_024315 Theobroma cacao TCM_024315 N
PRUPE_ppa016095mg Prunus persica PRUPE_ppa016095mg N
POPTR_0006s03560 Populus trichocarpa POPTR_0006s03560 N
MTR_1g048750 Medicago truncatula MTR_1g048750 N
MTR_1g048720 Medicago truncatula MTR_1g048720 N
MTR_1g048710 Medicago truncatula MTR_1g048710 N
GLYMA19G31361 Glycine max GLYMA19G31361 N
GLYMA19G31351 Glycine max GLYMA19G31351 N
GLYMA03G28630 Glycine max GLYMA03G28630 N