Bo3g028300 (Brassica oleracea)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bo3g028300 T057269_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP16
M06764_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a 		0.846 0.812
BZIP16
M06765_2.00 		Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a 		0.846 0.812
BZIP68
M01770_2.00 		Arabidopsis thaliana
BMCASGBND
HNVCSTGKV		 PBM
Weirauch et al.(2014)
pTH8192 		0.829 0.797
BZIP68
M06752_2.00 		Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH		 Dap-seq
OMalley et al.(2016)
bZIP68_col_a 		0.829 0.797
GBF1
M01783_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Weirauch et al.(2014)
pTH7259 		0.810 0.656
GBF1
M09913_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_01 		0.810 0.656
GBF1
M09914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1F_Q2 		0.810 0.656
GBF1
M09915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2_01 		0.810 0.656
GBF1
M09916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2 		0.810 0.656
PK23964.1
M01160_2.00 		Cannabis sativa
DNKMCACGTV
BACGTGKMNH		 PBM
Lambert et al.(2019)
pTH10151 		0.797 0.703
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g028300.1 bZIP 285 348

Links

Other bZIP family TFs
Other Brassica oleracea TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BZIP68 Arabidopsis thaliana AT1G32150 D 0.829
BZIP16 Arabidopsis thaliana AT2G35530 D 0.846
GBF1 Arabidopsis thaliana AT4G36730 D 0.810
PK23964.1 Cannabis sativa PK23964.1 D 0.797
AMTR_s00048p00108400 Amborella trichopoda AMTR_s00048p00108400 I 0.788
AMTR_s00059p00094730 Amborella trichopoda AMTR_s00059p00094730 I 0.841
BGIOSGA036419 Oryza indica BGIOSGA036419 I 0.795
Bo1g005460 Brassica oleracea Bo1g005460 I 0.795
Bo4g038560 Brassica oleracea Bo4g038560 I 0.858
Bo4g183320 Brassica oleracea Bo4g183320 I 0.821
Bra005335 Brassica rapa Bra005335 I 0.846
Bra010572 Brassica rapa Bra010572 I 0.804
Bra011701 Brassica rapa Bra011701 I 0.795
bZIP68 Arabidopsis lyrata fgenesh2_kg.1__3350__AT1G32150.1 I 0.829
GLYMA01G01740 Glycine max GLYMA01G01740 I 0.814
GLYMA01G38381 Glycine max GLYMA01G38381 I 0.798
GLYMA02G06550 Glycine max GLYMA02G06550 I 0.821
GLYMA08G34280 Glycine max GLYMA08G34280 I 0.795
GLYMA09G34170 Glycine max GLYMA09G34170 I 0.809
GLYMA16G15810 Glycine max GLYMA16G15810 I 0.807
GLYMA16G25600 Glycine max GLYMA16G25600 I 0.821
GRMZM2G019106 Zea mays GRMZM2G019106 I 0.784
GRMZM2G074373 Zea mays GRMZM2G074373 I 0.795
GRMZM2G153144 Zea mays GRMZM2G153144 I 0.784
GSMUA_AchrUn_randomG02860_001 Musa acuminata GSMUA_AchrUn_randomG02860_001 I 0.834
LPERR12G05920 Leersia perrieri LPERR12G05920 I 0.795
MTR_5g028850 Medicago truncatula MTR_5g028850 I 0.809
MTR_7g116890 Medicago truncatula MTR_7g116890 I 0.794
MTR_8g070820 Medicago truncatula MTR_8g070820 I 0.827
MTR_8g077950 Medicago truncatula MTR_8g077950 I 0.821
OB12G16310 Oryza brachyantha OB12G16310 I 0.795
OBART12G06770 Oryza barthii OBART12G06770 I 0.795
OGLUM12G08090 Oryza glumaepatula OGLUM12G08090 I 0.795
OLONG_021967 Oryza longistaminata OLONG_021967 I 0.795
OMERI12G04560 Oryza meridionalis OMERI12G04560 I 0.795
ONIVA12G06500 Oryza nivara ONIVA12G06500 I 0.795
OPUNC12G06450 Oryza punctata OPUNC12G06450 I 0.795
ORGLA12G0063500 Oryza glaberrima ORGLA12G0063500 I 0.795
ORUFI12G07600 Oryza rufipogon ORUFI12G07600 I 0.795
PGSC0003DMG400012660 Solanum tuberosum PGSC0003DMG400012660 I 0.836
PGSC0003DMG400018469 Solanum tuberosum PGSC0003DMG400018469 I 0.800
POPTR_0001s01840 Populus trichocarpa POPTR_0001s01840 I 0.797
POPTR_0003s09630 Populus trichocarpa POPTR_0003s09630 I 0.797
POPTR_0005s12750 Populus trichocarpa POPTR_0005s12750 I 0.788
POPTR_0007s12460 Populus trichocarpa POPTR_0007s12460 I 0.788
PRUPE_ppa006484mg Prunus persica PRUPE_ppa006484mg I 0.795
PRUPE_ppa008024mg Prunus persica PRUPE_ppa008024mg I 0.824
Sb04g002360 Sorghum bicolor Sb04g002360 I 0.784
Sb08g008300 Sorghum bicolor Sb08g008300 I 0.795
GBF1 Arabidopsis lyrata scaffold_700433.1 I 0.810
SELMODRAFT_135978 Selaginella moellendorffii SELMODRAFT_135978 I 0.810
Si017637m.g Setaria italica Si017637m.g I 0.784
Si022325m.g Setaria italica Si022325m.g I 0.795
Solyc02g062950.2 Solanum lycopersicum Solyc02g062950.2 I 0.820
Solyc02g085610.2 Solanum lycopersicum Solyc02g085610.2 I 0.836
Solyc08g005290.2 Solanum lycopersicum Solyc08g005290.2 I 0.800
Solyc08g076100.2 Solanum lycopersicum Solyc08g076100.2 I 0.803
TCM_000436 Theobroma cacao TCM_000436 I 0.814
TCM_016606 Theobroma cacao TCM_016606 I 0.794
VIT_02s0012g02250 Vitis vinifera VIT_02s0012g02250 I 0.807
GBF1 Vitis vinifera VIT_04s0023g01360 I 0.824
VIT_18s0001g12120 Vitis vinifera VIT_18s0001g12120 I 0.813
Ca_01293 Cicer arietinum Ca_01293 I 0.794
Ca_11455 Cicer arietinum Ca_11455 I 0.807
Ca_15839 Cicer arietinum Ca_15839 I 0.829
Cla008988 Citrullus lanatus Cla008988 I 0.809
Cla014415 Citrullus lanatus Cla014415 I 0.841
Cla016502 Citrullus lanatus Cla016502 I 0.807
Pm023132 Prunus mume Pm023132 I 0.795
Pm026586 Prunus mume Pm026586 I 0.824
29646.m001068 Ricinus communis 29646.m001068 I 0.785
30068.m002661 Ricinus communis 30068.m002661 I 0.797
cassava11837.valid.m1 Manihot esculenta cassava11837.valid.m1 I 0.797
cassava37043.valid.m1 Manihot esculenta cassava37043.valid.m1 I 0.797
cassava45491.m1 Manihot esculenta cassava45491.m1 I 0.785
Cucsa.104970 Cucumis sativus Cucsa.104970 I 0.841
Cucsa.312800 Cucumis sativus Cucsa.312800 I 0.805
Cucsa.322110 Cucumis sativus Cucsa.322110 I 0.809
estExt_fgenesh1_pg.C_10522 Micromonas pusilla estExt_fgenesh1_pg.C_10522 I 0.787
mgf000639m Mimulus guttatus mgf000639m I 0.830
mgf005151m Mimulus guttatus mgf005151m I 0.830
mgf008195m Mimulus guttatus mgf008195m I 0.797
mgf008605m Mimulus guttatus mgf008605m I 0.807
mgf013375m Mimulus guttatus mgf013375m I 0.796
mgf014804m Mimulus guttatus mgf014804m I 0.830
Bostr.23794s0549 Boechera stricta Bostr.23794s0549 I 0.846
Bostr.3359s0141 Boechera stricta Bostr.3359s0141 I 0.818
Bostr.7867s1529 Boechera stricta Bostr.7867s1529 I 0.810
Cagra.0993s0063 Capsella grandiflora Cagra.0993s0063 I 0.827
Cagra.3359s0011 Capsella grandiflora Cagra.3359s0011 I 0.829
Cagra.5996s0003 Capsella grandiflora Cagra.5996s0003 I 0.810
Carubv10005287m.g Capsella rubella Carubv10005287m.g I 0.810
Ciclev10001333m.g Citrus clementina Ciclev10001333m.g I 0.805
Ciclev10025963m.g Citrus clementina Ciclev10025963m.g I 0.824
estExt_fgenesh2_pg.C_Chr_020452 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_020452 I 0.787
Eucgr.E00223 Eucalyptus grandis Eucgr.E00223 I 0.807
Eucgr.H01256 Eucalyptus grandis Eucgr.H01256 I 0.806
evm.TU.supercontig_158.7 Carica papaya evm.TU.supercontig_158.7 I 0.821
evm.TU.supercontig_2741.1 Carica papaya evm.TU.supercontig_2741.1 I 0.799
gene13716-v1.0-hybrid Fragaria vesca gene13716-v1.0-hybrid I 0.797
gene18928-v1.0-hybrid Fragaria vesca gene18928-v1.0-hybrid I 0.783
gene29546-v1.0-hybrid Fragaria vesca gene29546-v1.0-hybrid I 0.793
Gorai.003G185700 Gossypium raimondii Gorai.003G185700 I 0.809
Gorai.004G181900 Gossypium raimondii Gorai.004G181900 I 0.790
Gorai.007G205700 Gossypium raimondii Gorai.007G205700 I 0.795
Gorai.008G068900 Gossypium raimondii Gorai.008G068900 I 0.814
gw2.11.550.1 Micromonas sp RCC299 gw2.11.550.1 I 0.789
Lus10014324.g Linum usitatissimum Lus10014324.g I 0.804
Lus10026033.g Linum usitatissimum Lus10026033.g I 0.804
MDP0000185553 Malus domestica MDP0000185553 I 0.797
MDP0000231274 Malus domestica MDP0000231274 I 0.836
MDP0000286846 Malus domestica MDP0000286846 I 0.797
orange1.1g018605m.g Citrus sinensis orange1.1g018605m.g I 0.824
orange1.1g036551m.g Citrus sinensis orange1.1g036551m.g I 0.805
Pavir.Aa03436 Panicum virgatum Pavir.Aa03436 I 0.784
Pavir.Ab00132 Panicum virgatum Pavir.Ab00132 I 0.784
Pavir.Ca00403 Panicum virgatum Pavir.Ca00403 I 0.795
Pavir.Cb01814 Panicum virgatum Pavir.Cb01814 I 0.795
SapurV1A.0051s0250 Salix purpurea SapurV1A.0051s0250 I 0.809
SapurV1A.0063s0130 Salix purpurea SapurV1A.0063s0130 I 0.797
SapurV1A.0255s0070 Salix purpurea SapurV1A.0255s0070 I 0.788
SapurV1A.0817s0110 Salix purpurea SapurV1A.0817s0110 I 0.805
Thhalv10007879m.g Eutrema salsugineum Thhalv10007879m.g I 0.829
Thhalv10016740m.g Eutrema salsugineum Thhalv10016740m.g I 0.822
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I 0.804
chr1.CM0579.280.nd Lotus japonicus chr1.CM0579.280.nd I 0.783
chr2.LjT41P23.50.nc Lotus japonicus chr2.LjT41P23.50.nc I 0.807
LjSGA_036158.1 Lotus japonicus LjSGA_036158.1 I 0.806
PDK_20s1310372g001 Phoenix dactylifera PDK_20s1310372g001 I 0.784
PDK_20s1368181g001 Phoenix dactylifera PDK_20s1368181g001 I 0.807
PDK_20s1372692g002 Phoenix dactylifera PDK_20s1372692g002 I 0.832