Bo4g012700 (Brassica oleracea)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bo4g012700 T057287_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP18
M01777_2.00 		Arabidopsis thaliana
NDMCARNHNN
NNDNYTGKHN		 PBM
Weirauch et al.(2014)
pTH7316 		0.846 0.984
BZIP18
M06768_2.00 		Arabidopsis thaliana
DTGMCAGCTDD
HHAGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a 		0.846 0.984
BZIP18
M06769_2.00 		Arabidopsis thaliana
TGMCAGCTKKN
NMMAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP18_col_v31 		0.846 0.984
PK00315.1
M01153_2.00 		Cannabis sativa
NNGACAGCTRN
NYAGCTGTCNN		 PBM
Lambert et al.(2019)
pTH10085 		0.831 0.935
PK16335.1
M01157_2.00 		Cannabis sativa
NNNNKACAGCTRN
NYAGCTGTMNNNN		 PBM
Lambert et al.(2019)
pTH10187 		0.831 0.935
AtbZIP52
M06746_2.00 		Arabidopsis thaliana
DTGMCAGCYBDNHH
DDNHVRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a 		0.817 0.871
AtbZIP52
M06747_2.00 		Arabidopsis thaliana
DTGMCAGCYKDNHN
NDNHMRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_col_v31 		0.817 0.871
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g012700.1 bZIP 136 197

Links

Other bZIP family TFs
Other Brassica oleracea TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT1G06070 Arabidopsis thaliana AT1G06070 D
PK20942.1 Cannabis sativa PK20942.1 D
Carubv10008993m.g Capsella rubella Carubv10008993m.g I
Eucgr.D00737 Eucalyptus grandis Eucgr.D00737 I
Cagra.1671s0236 Capsella grandiflora Cagra.1671s0236 I
Bostr.25542s0069 Boechera stricta Bostr.25542s0069 I
Bostr.25219s0353 Boechera stricta Bostr.25219s0353 I
Aquca_058_00063 Aquilegia coerulea Aquca_058_00063 I
mgf004912m Mimulus guttatus mgf004912m I
mgf000302m Mimulus guttatus mgf000302m I
gw1.20.225.1 Physcomitrella patens gw1.20.225.1 I
estExt_gwp_gw1.C_5120003 Physcomitrella patens estExt_gwp_gw1.C_5120003 I
estExt_gwp_gw1.C_200078 Physcomitrella patens estExt_gwp_gw1.C_200078 I
e_gw1.20.99.1 Physcomitrella patens e_gw1.20.99.1 I
Cucsa.382190 Cucumis sativus Cucsa.382190 I
Cucsa.382180 Cucumis sativus Cucsa.382180 I
Cucsa.251880 Cucumis sativus Cucsa.251880 I
Cucsa.062530 Cucumis sativus Cucsa.062530 I
cassava43164.valid.m1 Manihot esculenta cassava43164.valid.m1 I
cassava38273.valid.m1 Manihot esculenta cassava38273.valid.m1 I
cassava32399.m1 Manihot esculenta cassava32399.m1 I
cassava30160.valid.m1 Manihot esculenta cassava30160.valid.m1 I
Pm007522 Prunus mume Pm007522 I
Cla022204 Citrullus lanatus Cla022204 I
Cla022201 Citrullus lanatus Cla022201 I
Lus10018061.g Linum usitatissimum Lus10018061.g I
chr3.CM0106.340.nd Lotus japonicus chr3.CM0106.340.nd I
PK00843.1 Cannabis sativa PK00843.1 I
Thhalv10024895m.g Eutrema salsugineum Thhalv10024895m.g I
Thhalv10007692m.g Eutrema salsugineum Thhalv10007692m.g I
SapurV1A.0379s0290 Salix purpurea SapurV1A.0379s0290 I
SapurV1A.0091s0130 Salix purpurea SapurV1A.0091s0130 I
orange1.1g007579m.g Citrus sinensis orange1.1g007579m.g I
MDP0000435971 Malus domestica MDP0000435971 I
MDP0000234166 Malus domestica MDP0000234166 I
Lus10042057.g Linum usitatissimum Lus10042057.g I
Lus10019376.g Linum usitatissimum Lus10019376.g I
Ciclev10028062m.g Citrus clementina Ciclev10028062m.g I
Lus10008150.g Linum usitatissimum Lus10008150.g I
Gorai.011G140400 Gossypium raimondii Gorai.011G140400 I
Gorai.006G229500 Gossypium raimondii Gorai.006G229500 I
Gorai.005G248900 Gossypium raimondii Gorai.005G248900 I
Gorai.005G015900 Gossypium raimondii Gorai.005G015900 I
Gorai.001G243800 Gossypium raimondii Gorai.001G243800 I
gene23487-v1.0-hybrid Fragaria vesca gene23487-v1.0-hybrid I
gene01680-v1.0-hybrid Fragaria vesca gene01680-v1.0-hybrid I
evm.TU.supercontig_150.7 Carica papaya evm.TU.supercontig_150.7 I
Eucgr.I01335 Eucalyptus grandis Eucgr.I01335 I
Cla016125 Citrullus lanatus Cla016125 I
GLYMA11G11791 Glycine max GLYMA11G11791 I
MTR_4g072090 Medicago truncatula MTR_4g072090 I
MLOC_64781 Hordeum vulgare MLOC_64781 I
MLOC_64362 Hordeum vulgare MLOC_64362 I
GSMUA_AchrUn_randomG00680_001 Musa acuminata GSMUA_AchrUn_randomG00680_001 I
GSMUA_Achr5G25700_001 Musa acuminata GSMUA_Achr5G25700_001 I
GSMUA_Achr3G12290_001 Musa acuminata GSMUA_Achr3G12290_001 I
GSMUA_Achr11G14990_001 Musa acuminata GSMUA_Achr11G14990_001 I
GLYMA15G03350 Glycine max GLYMA15G03350 I
GLYMA13G42030 Glycine max GLYMA13G42030 I
GLYMA12G05520 Glycine max GLYMA12G05520 I
GLYMA12G04050 Glycine max GLYMA12G04050 I
GLYMA11G13510 Glycine max GLYMA11G13510 I
OB09G23080 Oryza brachyantha OB09G23080 I
GLYMA04G02850 Glycine max GLYMA04G02850 I
F775_13434 Aegilops tauschii F775_13434 I
BRADI5G14497 Brachypodium distachyon BRADI5G14497 I
Bra033582 Brassica rapa Bra033582 I
Bra030637 Brassica rapa Bra030637 I
Bra015471 Brassica rapa Bra015471 I
Bra010722 Brassica rapa Bra010722 I
Bo8g005940 Brassica oleracea Bo8g005940 I
Bo7g119550 Brassica oleracea Bo7g119550 I
Bo5g007170 Brassica oleracea Bo5g007170 I
Bo3g149620 Brassica oleracea Bo3g149620 I
AT4G38900 Arabidopsis thaliana AT4G38900 I
SELMODRAFT_129846 Selaginella moellendorffii SELMODRAFT_129846 I
Ca_27693 Cicer arietinum Ca_27693 I
VIT_05s0102g01120 Vitis vinifera VIT_05s0102g01120 I
VIT_03s0038g00860 Vitis vinifera VIT_03s0038g00860 I
TRIUR3_16287 Triticum urartu TRIUR3_16287 I
Traes_7DS_47B5A7FFF Triticum aestivum Traes_7DS_47B5A7FFF I
Traes_2AL_FA1957F59 Triticum aestivum Traes_2AL_FA1957F59 I
TCM_019998 Theobroma cacao TCM_019998 I
TCM_006766 Theobroma cacao TCM_006766 I
Solyc06g053350.2 Solanum lycopersicum Solyc06g053350.2 I
Solyc01g110480.2 Solanum lycopersicum Solyc01g110480.2 I
SELMODRAFT_77868 Selaginella moellendorffii SELMODRAFT_77868 I
SELMODRAFT_34663 Selaginella moellendorffii SELMODRAFT_34663 I
Cla016124 Citrullus lanatus Cla016124 I
scaffold_100594.1 Arabidopsis lyrata scaffold_100594.1 I
Sb06g021350 Sorghum bicolor Sb06g021350 I
POPTR_0017s05610 Populus trichocarpa POPTR_0017s05610 I
POPTR_0009s12830 Populus trichocarpa POPTR_0009s12830 I
POPTR_0004s17080 Populus trichocarpa POPTR_0004s17080 I
PGSC0003DMG400001659 Solanum tuberosum PGSC0003DMG400001659 I
RF2A Oryza sativa OS09G0516200 I
OMERI09G12160 Oryza meridionalis OMERI09G12160 I
OGLUM09G17020 Oryza glumaepatula OGLUM09G17020 I
Cagra.1383s0070 Capsella grandiflora Cagra.1383s0070 N
Carubv10004500m.g Capsella rubella Carubv10004500m.g N