Carubv10008993m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10008993m.g T071558_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20942.1
M01159_2.00 		Cannabis sativa
NNNNDAMAKCTRN
NYAGMTKTHNNNN		 PBM
Lambert et al.(2019)
pTH11276 		0.900 0.935
AT1G06070
M06744_2.00 		Arabidopsis thaliana
TGMCAGCTGKM
KMCAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP69_col_a 		0.895 0.968
AT1G06070
M06745_2.00 		Arabidopsis thaliana
TGMCAGCTGKM
KMCAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP69_colamp_a 		0.895 0.968
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10008993m bZIP 275 336

Links

Other bZIP family TFs
Other Capsella rubella TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo8g005940 Brassica oleracea Bo8g005940 I 0.914
scaffold_100594.1 Arabidopsis lyrata scaffold_100594.1 I 0.914
Cucsa.251880 Cucumis sativus Cucsa.251880 I 0.914
Bostr.25219s0353 Boechera stricta Bostr.25219s0353 I 0.914
Cagra.1671s0236 Capsella grandiflora Cagra.1671s0236 I 0.914
Thhalv10007692m.g Eutrema salsugineum Thhalv10007692m.g I 0.914
Gorai.006G229500 Gossypium raimondii Gorai.006G229500 I 0.913
Bo5g007170 Brassica oleracea Bo5g007170 I 0.902
Bra015471 Brassica rapa Bra015471 I 0.902
Bra030637 Brassica rapa Bra030637 I 0.902
GLYMA11G13510 Glycine max GLYMA11G13510 I 0.900
GLYMA12G05520 Glycine max GLYMA12G05520 I 0.900
GLYMA13G42030 Glycine max GLYMA13G42030 I 0.900
GLYMA15G03350 Glycine max GLYMA15G03350 I 0.900
POPTR_0017s05610 Populus trichocarpa POPTR_0017s05610 I 0.900
TCM_019998 Theobroma cacao TCM_019998 I 0.900
VIT_05s0102g01120 Vitis vinifera VIT_05s0102g01120 I 0.900
Ca_02692 Cicer arietinum Ca_02692 I 0.900
cassava32399.m1 Manihot esculenta cassava32399.m1 I 0.900
cassava43164.valid.m1 Manihot esculenta cassava43164.valid.m1 I 0.900
gene23487-v1.0-hybrid Fragaria vesca gene23487-v1.0-hybrid I 0.900
PK20942.1 Cannabis sativa PK20942.1 D 0.900
chr3.CM0106.340.nd Lotus japonicus chr3.CM0106.340.nd I 0.900
Cucsa.062530 Cucumis sativus Cucsa.062530 I 0.899
Gorai.005G015900 Gossypium raimondii Gorai.005G015900 I 0.898
AT1G06070 Arabidopsis thaliana AT1G06070 D 0.895
Lus10019376.g Linum usitatissimum Lus10019376.g I 0.892
Solyc06g053350.2 Solanum lycopersicum Solyc06g053350.2 I 0.888
Eucgr.D00737 Eucalyptus grandis Eucgr.D00737 I 0.888
MLOC_64781 Hordeum vulgare MLOC_64781 I 0.886
OB09G23080 Oryza brachyantha OB09G23080 I 0.886
OGLUM09G17020 Oryza glumaepatula OGLUM09G17020 I 0.886
OMERI09G12160 Oryza meridionalis OMERI09G12160 I 0.886
RF2A Oryza sativa OS09G0516200 I 0.886
Gorai.011G140400 Gossypium raimondii Gorai.011G140400 I 0.885
TRIUR3_16287 Triticum urartu TRIUR3_16287 I 0.872
Traes_7DS_47B5A7FFF Triticum aestivum Traes_7DS_47B5A7FFF I 0.860
Cla022201 Citrullus lanatus Cla022201 I 0.856
Lus10008150.g Linum usitatissimum Lus10008150.g I 0.856
Cla022204 Citrullus lanatus Cla022204 I 0.855
Pm007522 Prunus mume Pm007522 I 0.851
MDP0000435971 Malus domestica MDP0000435971 I 0.851
F775_13434 Aegilops tauschii F775_13434 I 0.830
Aquca_058_00063 Aquilegia coerulea Aquca_058_00063 I 0.809
MLOC_64362 Hordeum vulgare MLOC_64362 I 0.808
Traes_2AL_FA1957F59 Triticum aestivum Traes_2AL_FA1957F59 I 0.808
gene01680-v1.0-hybrid Fragaria vesca gene01680-v1.0-hybrid I 0.807
MDP0000234166 Malus domestica MDP0000234166 I 0.807
GSMUA_Achr11G14990_001 Musa acuminata GSMUA_Achr11G14990_001 I 0.803
GSMUA_AchrUn_randomG00680_001 Musa acuminata GSMUA_AchrUn_randomG00680_001 I 0.803
SELMODRAFT_129846 Selaginella moellendorffii SELMODRAFT_129846 I 0.803
SELMODRAFT_34663 Selaginella moellendorffii SELMODRAFT_34663 I 0.803
SELMODRAFT_77868 Selaginella moellendorffii SELMODRAFT_77868 I 0.803
GSMUA_Achr5G25700_001 Musa acuminata GSMUA_Achr5G25700_001 I 0.802
Sb06g021350 Sorghum bicolor Sb06g021350 I 0.801
estExt_gwp_gw1.C_5120003 Physcomitrella patens estExt_gwp_gw1.C_5120003 I 0.801
gw1.20.225.1 Physcomitrella patens gw1.20.225.1 I 0.801
e_gw1.20.99.1 Physcomitrella patens e_gw1.20.99.1 I 0.799
estExt_gwp_gw1.C_200078 Physcomitrella patens estExt_gwp_gw1.C_200078 I 0.799
GLYMA04G02850 Glycine max GLYMA04G02850 I 0.797
BRADI5G14497 Brachypodium distachyon BRADI5G14497 I 0.796
AT4G38900 Arabidopsis thaliana AT4G38900 I 0.793
BGIOSGA029105 Oryza indica BGIOSGA029105 I 0.793
BGIOSGA029106 Oryza indica BGIOSGA029106 I 0.793
Bo7g119550 Brassica oleracea Bo7g119550 I 0.793
Bra010722 Brassica rapa Bra010722 I 0.793
Bra033582 Brassica rapa Bra033582 I 0.793
BRADI3G41980 Brachypodium distachyon BRADI3G41980 I 0.793
F775_32059 Aegilops tauschii F775_32059 I 0.793
GLYMA11G11791 Glycine max GLYMA11G11791 I 0.793
GLYMA12G04050 Glycine max GLYMA12G04050 I 0.793
GSMUA_Achr3G12290_001 Musa acuminata GSMUA_Achr3G12290_001 I 0.793
MLOC_75510 Hordeum vulgare MLOC_75510 I 0.793
MTR_4g072090 Medicago truncatula MTR_4g072090 I 0.793
PGSC0003DMG400001659 Solanum tuberosum PGSC0003DMG400001659 I 0.793
POPTR_0004s17080 Populus trichocarpa POPTR_0004s17080 I 0.793
POPTR_0009s12830 Populus trichocarpa POPTR_0009s12830 I 0.793
Solyc01g110480.2 Solanum lycopersicum Solyc01g110480.2 I 0.793
TCM_006766 Theobroma cacao TCM_006766 I 0.793
Traes_7BS_7B68879A9 Triticum aestivum Traes_7BS_7B68879A9 I 0.793
Traes_7DS_3463CAE33 Triticum aestivum Traes_7DS_3463CAE33 I 0.793
TRIUR3_31242 Triticum urartu TRIUR3_31242 I 0.793
VIT_03s0038g00860 Vitis vinifera VIT_03s0038g00860 I 0.793
Ca_27693 Cicer arietinum Ca_27693 I 0.793
Cla016124 Citrullus lanatus Cla016124 I 0.793
Cla016125 Citrullus lanatus Cla016125 I 0.793
cassava30160.valid.m1 Manihot esculenta cassava30160.valid.m1 I 0.793
cassava38273.valid.m1 Manihot esculenta cassava38273.valid.m1 I 0.793
Cucsa.382180 Cucumis sativus Cucsa.382180 I 0.793
Cucsa.382190 Cucumis sativus Cucsa.382190 I 0.793
mgf000302m Mimulus guttatus mgf000302m I 0.793
mgf004912m Mimulus guttatus mgf004912m I 0.793
Aquca_006_00159 Aquilegia coerulea Aquca_006_00159 I 0.793
Bostr.25542s0069 Boechera stricta Bostr.25542s0069 I 0.793
Ciclev10028062m.g Citrus clementina Ciclev10028062m.g I 0.793
Eucgr.I01335 Eucalyptus grandis Eucgr.I01335 I 0.793
evm.TU.supercontig_150.7 Carica papaya evm.TU.supercontig_150.7 I 0.793
Gorai.001G243800 Gossypium raimondii Gorai.001G243800 I 0.793
Gorai.005G248900 Gossypium raimondii Gorai.005G248900 I 0.793
Lus10018061.g Linum usitatissimum Lus10018061.g I 0.793
Lus10042057.g Linum usitatissimum Lus10042057.g I 0.793
orange1.1g007579m.g Citrus sinensis orange1.1g007579m.g I 0.793
SapurV1A.0091s0130 Salix purpurea SapurV1A.0091s0130 I 0.793
SapurV1A.0379s0290 Salix purpurea SapurV1A.0379s0290 I 0.793
Thhalv10024895m.g Eutrema salsugineum Thhalv10024895m.g I 0.793
PK00843.1 Cannabis sativa PK00843.1 I 0.793
Bo3g149620 Brassica oleracea Bo3g149620 I 0.787
Cagra.1383s0070 Capsella grandiflora Cagra.1383s0070 N 0.782
Carubv10004500m.g Capsella rubella Carubv10004500m.g N 0.782