CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI1G68560
(
Brachypodium distachyon
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
BRADI1G68560
T057559_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BZIP16
M06764_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a
0.797
0.625
BZIP16
M06765_2.00
Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a
0.797
0.625
PK23964.1
M01160_2.00
Cannabis sativa
DNKMCACGTV
BACGTGKMNH
PBM
Lambert et al.(2019)
pTH10151
0.784
0.688
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G68560.1
bZIP
300
363
EREVKRQKRKQSNRESARRSRLRKQAEWEEVANRADLLKQENSSLKEELKRLQEKCDSLTSENT
BRADI1G68560.3
bZIP
300
363
EREVKRQKRKQSNRESARRSRLRKQAEWEEVANRADLLKQENSSLKEELKRLQEKCDSLTSENT
BRADI1G68560.3
bZIP
345
379
KEELKRLQEKCDSLTSENTSLHEKLKELDGEKSNG
Links
Other
bZIP
family TFs
Other
Brachypodium distachyon
TFs
86 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BZIP16
Arabidopsis thaliana
AT2G35530
D
0.797
PK23964.1
Cannabis sativa
PK23964.1
D
0.784
Ciclev10025963m.g
Citrus clementina
Ciclev10025963m.g
I
0.800
GBF1
Vitis vinifera
VIT_04s0023g01360
I
0.800
Ciclev10001333m.g
Citrus clementina
Ciclev10001333m.g
I
0.795
Bostr.23794s0549
Boechera stricta
Bostr.23794s0549
I
0.797
Aquca_002_01218
Aquilegia coerulea
Aquca_002_01218
I
0.801
mgf014804m
Mimulus guttatus
mgf014804m
I
0.790
mgf008195m
Mimulus guttatus
mgf008195m
I
0.786
mgf005151m
Mimulus guttatus
mgf005151m
I
0.790
mgf000639m
Mimulus guttatus
mgf000639m
I
0.790
Cucsa.312800
Cucumis sativus
Cucsa.312800
I
0.794
Cucsa.104970
Cucumis sativus
Cucsa.104970
I
0.800
cassava37043.valid.m1
Manihot esculenta
cassava37043.valid.m1
I
0.784
cassava11837.valid.m1
Manihot esculenta
cassava11837.valid.m1
I
0.784
30068.m002661
Ricinus communis
30068.m002661
I
0.784
Pm026586
Prunus mume
Pm026586
I
0.800
Pm023132
Prunus mume
Pm023132
I
0.784
Cla016502
Citrullus lanatus
Cla016502
I
0.795
Cla014415
Citrullus lanatus
Cla014415
I
0.800
Ca_11455
Cicer arietinum
Ca_11455
I
0.795
VIT_18s0001g12120
Vitis vinifera
VIT_18s0001g12120
I
0.788
PDK_20s1708971g001
Phoenix dactylifera
PDK_20s1708971g001
I
0.825
orange1.1g036551m.g
Citrus sinensis
orange1.1g036551m.g
I
0.795
AMTR_s00059p00094730
Amborella trichopoda
AMTR_s00059p00094730
I
0.799
PDK_20s1372692g002
Phoenix dactylifera
PDK_20s1372692g002
I
0.825
PDK_20s1368181g001
Phoenix dactylifera
PDK_20s1368181g001
I
0.796
LjSGA_036158.1
Lotus japonicus
LjSGA_036158.1
I
0.795
chr2.LjT41P23.50.nc
Lotus japonicus
chr2.LjT41P23.50.nc
I
0.795
Thhalv10016740m.g
Eutrema salsugineum
Thhalv10016740m.g
I
0.790
SapurV1A.0063s0130
Salix purpurea
SapurV1A.0063s0130
I
0.784
SapurV1A.0051s0250
Salix purpurea
SapurV1A.0051s0250
I
0.795
Pavir.Cb01814
Panicum virgatum
Pavir.Cb01814
I
0.784
Pavir.Ca00403
Panicum virgatum
Pavir.Ca00403
I
0.784
Eucgr.E00223
Eucalyptus grandis
Eucgr.E00223
I
0.795
orange1.1g018605m.g
Citrus sinensis
orange1.1g018605m.g
I
0.800
MDP0000286846
Malus domestica
MDP0000286846
I
0.784
MDP0000231274
Malus domestica
MDP0000231274
I
0.811
MDP0000185553
Malus domestica
MDP0000185553
I
0.784
Gorai.008G068900
Gossypium raimondii
Gorai.008G068900
I
0.797
Gorai.003G185700
Gossypium raimondii
Gorai.003G185700
I
0.795
gene13716-v1.0-hybrid
Fragaria vesca
gene13716-v1.0-hybrid
I
0.784
evm.TU.supercontig_2741.1
Carica papaya
evm.TU.supercontig_2741.1
I
0.786
evm.TU.supercontig_158.7
Carica papaya
evm.TU.supercontig_158.7
I
0.797
GLYMA16G25600
Glycine max
GLYMA16G25600
I
0.794
OBART12G06770
Oryza barthii
OBART12G06770
I
0.784
OB12G16310
Oryza brachyantha
OB12G16310
I
0.784
MTR_8g077950
Medicago truncatula
MTR_8g077950
I
0.794
MTR_5g028850
Medicago truncatula
MTR_5g028850
I
0.795
LPERR12G05920
Leersia perrieri
LPERR12G05920
I
0.784
GSMUA_Achr5G14150_001
Musa acuminata
GSMUA_Achr5G14150_001
I
0.789
GSMUA_Achr4G18980_001
Musa acuminata
GSMUA_Achr4G18980_001
I
0.789
GSMUA_Achr4G11610_001
Musa acuminata
GSMUA_Achr4G11610_001
I
0.783
GSMUA_Achr4G04530_001
Musa acuminata
GSMUA_Achr4G04530_001
I
0.793
GRMZM2G074373
Zea mays
GRMZM2G074373
I
0.784
OGLUM12G08090
Oryza glumaepatula
OGLUM12G08090
I
0.784
GLYMA16G15810
Glycine max
GLYMA16G15810
I
0.795
GLYMA09G34170
Glycine max
GLYMA09G34170
I
0.795
GLYMA08G34280
Glycine max
GLYMA08G34280
I
0.784
GLYMA02G06550
Glycine max
GLYMA02G06550
I
0.794
GLYMA01G38381
Glycine max
GLYMA01G38381
I
0.784
GLYMA01G01740
Glycine max
GLYMA01G01740
I
0.800
Bra005335
Brassica rapa
Bra005335
I
0.797
Bo4g038560
Brassica oleracea
Bo4g038560
I
0.809
BGIOSGA036419
Oryza indica
BGIOSGA036419
I
0.784
POPTR_0003s09630
Populus trichocarpa
POPTR_0003s09630
I
0.784
TCM_000436
Theobroma cacao
TCM_000436
I
0.797
Solyc08g076100.2
Solanum lycopersicum
Solyc08g076100.2
I
0.791
Solyc08g005290.2
Solanum lycopersicum
Solyc08g005290.2
I
0.786
Solyc02g085610.2
Solanum lycopersicum
Solyc02g085610.2
I
0.812
Solyc02g062950.2
Solanum lycopersicum
Solyc02g062950.2
I
0.797
Si022325m.g
Setaria italica
Si022325m.g
I
0.784
SELMODRAFT_135978
Selaginella moellendorffii
SELMODRAFT_135978
I
0.783
Sb08g008300
Sorghum bicolor
Sb08g008300
I
0.784
PRUPE_ppa008024mg
Prunus persica
PRUPE_ppa008024mg
I
0.800
PRUPE_ppa006484mg
Prunus persica
PRUPE_ppa006484mg
I
0.784
VIT_02s0012g02250
Vitis vinifera
VIT_02s0012g02250
I
0.795
POPTR_0001s01840
Populus trichocarpa
POPTR_0001s01840
I
0.784
PGSC0003DMG400018469
Solanum tuberosum
PGSC0003DMG400018469
I
0.786
PGSC0003DMG400012660
Solanum tuberosum
PGSC0003DMG400012660
I
0.812
ORUFI12G07600
Oryza rufipogon
ORUFI12G07600
I
0.784
ORGLA12G0063500
Oryza glaberrima
ORGLA12G0063500
I
0.784
OPUNC12G06450
Oryza punctata
OPUNC12G06450
I
0.784
ONIVA12G06500
Oryza nivara
ONIVA12G06500
I
0.784
OMERI12G04560
Oryza meridionalis
OMERI12G04560
I
0.784
OLONG_021967
Oryza longistaminata
OLONG_021967
I
0.784