CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000006835
(
Pelodiscus sinensis
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSPSIG00000006835
T061171_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tef
M01803_2.00
Mus musculus
NVTTRYVNNN
NNNBRYAABN
PBM
Weirauch et al.(2014)
pTH5078
0.891
0.984
TEF
M02849_2.00
Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN
SELEX
Jolma et al.(2013)
TEF_1
0.891
0.984
TEF
M02850_2.00
Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN
SELEX
Jolma et al.(2013)
TEF_2
0.891
0.984
TEF
M04325_2.00
Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX
0.891
0.984
TEF
M09983_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_05
0.891
0.984
TEF
M09984_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_06
0.891
0.984
TEF
M09985_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_Q6
0.891
0.984
TEF
M09986_2.00
Homo sapiens
MTKAYGTAAY
RTTACRTMAK
Transfac
Matys et al.(2006)
V$VBP_01
0.891
0.984
TEF
M04326_2.00
Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX
0.891
0.984
HLF
M02831_2.00
Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN
SELEX
Jolma et al.(2013)
HLF_1
0.847
0.797
Hlf
M02860_2.00
Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM
SELEX
Jolma et al.(2013)
Hlf_1
0.847
0.797
HLF
M04245_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX
0.847
0.797
HLF
M04016_2.00
Homo sapiens
RTKAYRTAAB
VTTAYRTMAY
SELEX
Rodriguez-Martinez et al.(2017)
HLF.1
0.847
0.797
HLF
M08786_2.00
Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN
Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C
0.847
0.797
Hlf
M08815_2.00
Mus musculus
VTTRTGYAABH
DVTTRCAYAAB
Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C
0.847
0.797
HLF
M09937_2.00
Homo sapiens
ATKRYGTAAY
RTTACRYMAT
Transfac
Matys et al.(2006)
V$HLF_01
0.847
0.797
HLF
M04246_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX
0.847
0.797
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000007490
bZIP
216
279
QKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKNIVS
Links
Other
bZIP
family TFs
Other
Pelodiscus sinensis
TFs
184 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LYS14
Saccharomyces cerevisiae
YDR034C
D
SU7_0595
Saccharomyces arboricola
SU7_0595
I
SAKL0D03586g
Lachancea kluyveri
SAKL0D03586g
I
3859_YDR034C
Saccharomyces paradoxus
3859_YDR034C
I
3344_Multiple
Saccharomyces mikatae
3344_Multiple
I
21342_YDR034C
Saccharomyces bayanus
21342_YDR034C
I
ZYRO0A03058g
Zygosaccharomyces rouxii
ZYRO0A03058g
I
ZBAI_06624
Zygosaccharomyces bailii
ZBAI_06624
I
ZBAI_04585
Zygosaccharomyces bailii
ZBAI_04585
I
TBLA_0I01890
Tetrapisispora blattae
TBLA_0I01890
I
AACERI_AaceriABL099W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriABL099W
I
SKUD_203807
Saccharomyces kudriavzevii
SKUD_203807
I
NDAI_0A05750
Naumovozyma dairenensis
NDAI_0A05750
I
Kpol_1061p11
Vanderwaltozyma polyspora
Kpol_1061p11
I
KNAG_0H01260
Kazachstania naganishii
KNAG_0H01260
I
KLLA0_F04213g
Kluyveromyces lactis
KLLA0_F04213g
I
KAFR_0E01250
Kazachstania africana
KAFR_0E01250
I
Ecym_5131
Eremothecium cymbalariae
Ecym_5131
I
CAGL0K11902g
Candida glabrata
CAGL0K11902g
I
LALA0_S02e08724g
Lachancea lanzarotensis
LALA0_S02e08724g
N
KLTH0C07480g
Lachancea thermotolerans
KLTH0C07480g
N
KLTH0C07480g
Kluyveromyces thermotolerans
KLTH0C07480g
N
Kwal_23058
Kluyveromyces waltii
Kwal_23058
N
AGOS_ABL099W
Ashbya gossypii
AGOS_ABL099W
N