CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTNIG00000002167
(
Tetraodon nigroviridis
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSTNIG00000002167
T061582_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HLF
M02831_2.00
Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN
SELEX
Jolma et al.(2013)
HLF_1
0.826
0.852
Hlf
M02860_2.00
Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM
SELEX
Jolma et al.(2013)
Hlf_1
0.826
0.852
HLF
M04245_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX
0.826
0.852
HLF
M04016_2.00
Homo sapiens
RTKAYRTAAB
VTTAYRTMAY
SELEX
Rodriguez-Martinez et al.(2017)
HLF.1
0.826
0.852
HLF
M08786_2.00
Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN
Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C
0.826
0.852
Hlf
M08815_2.00
Mus musculus
VTTRTGYAABH
DVTTRCAYAAB
Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C
0.826
0.852
HLF
M09937_2.00
Homo sapiens
ATKRYGTAAY
RTTACRYMAT
Transfac
Matys et al.(2006)
V$HLF_01
0.826
0.852
HLF
M04246_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX
0.826
0.852
Tef
M01803_2.00
Mus musculus
NVTTRYVNNN
NNNBRYAABN
PBM
Weirauch et al.(2014)
pTH5078
0.807
0.738
TEF
M02849_2.00
Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN
SELEX
Jolma et al.(2013)
TEF_1
0.807
0.738
TEF
M02850_2.00
Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN
SELEX
Jolma et al.(2013)
TEF_2
0.807
0.738
TEF
M04325_2.00
Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX
0.807
0.738
TEF
M09983_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_05
0.807
0.738
TEF
M09984_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_06
0.807
0.738
TEF
M09985_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_Q6
0.807
0.738
TEF
M09986_2.00
Homo sapiens
MTKAYGTAAY
RTTACRTMAK
Transfac
Matys et al.(2006)
V$VBP_01
0.807
0.738
TEF
M04326_2.00
Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX
0.807
0.738
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000004605
bZIP
69
132
DMKDERYWARRRKNNVAAKRSRDARRLKENQIAIRASFLEKENALRVEVADIRKELGRCKNILA
Links
Other
bZIP
family TFs
Other
Tetraodon nigroviridis
TFs
162 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA000702
Oryza indica
BGIOSGA000702
N
0.000
F775_27782
Aegilops tauschii
F775_27782
N
0.000
LPERR01G28620
Leersia perrieri
LPERR01G28620
N
0.000
OB01G42000
Oryza brachyantha
OB01G42000
N
0.000
OBART01G33150
Oryza barthii
OBART01G33150
N
0.000
OGLUM01G37340
Oryza glumaepatula
OGLUM01G37340
N
0.000
OLONG_014986
Oryza longistaminata
OLONG_014986
N
0.000
OMERI01G30050
Oryza meridionalis
OMERI01G30050
N
0.000
ONIVA01G37460
Oryza nivara
ONIVA01G37460
N
0.000
ORGLA01G0271200
Oryza glaberrima
ORGLA01G0271200
N
0.000
ORUFI01G36290
Oryza rufipogon
ORUFI01G36290
N
0.000
OS01G0780800
Oryza sativa
OS01G0780800
N
0.000
Traes_3B_B45DB8F05
Triticum aestivum
Traes_3B_B45DB8F05
N
0.000
TRAES3BF022700050CFD_g
Triticum aestivum
TRAES3BF022700050CFD_g
N
0.000
TRAES3BF022800010CFD_g
Triticum aestivum
TRAES3BF022800010CFD_g
N
0.000