TCM_007074 (Theobroma cacao)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 TCM_007074 T068429_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.872 0.871
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.850 0.823
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.850 0.823
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.850 0.823
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.815 0.629
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.815 0.629
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.815 0.694
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.815 0.694
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.815 0.694
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.815 0.694
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.815 0.694
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.815 0.694
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.807 0.823
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.807 0.823
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.806 0.694
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOX98270 bZIP 345 406
EOX98271 bZIP 345 406

Links

Other bZIP family TFs
Other Theobroma cacao TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRIUR3_17772 Triticum urartu TRIUR3_17772 N
Sb10g030250 Sorghum bicolor Sb10g030250 N
Si007107m.g Setaria italica Si007107m.g N
Si037105m.g Setaria italica Si037105m.g N
TCM_042360 Theobroma cacao TCM_042360 N
Traes_5AS_6F02C9967 Triticum aestivum Traes_5AS_6F02C9967 N
Traes_5BS_FC54F9BEA Triticum aestivum Traes_5BS_FC54F9BEA N
Traes_5DS_4F7973584 Triticum aestivum Traes_5DS_4F7973584 N
Traes_7AL_C7CF7087B Triticum aestivum Traes_7AL_C7CF7087B N
Traes_7DL_70D4FDB2A Triticum aestivum Traes_7DL_70D4FDB2A N
Traes_7DL_7DDA16622 Triticum aestivum Traes_7DL_7DDA16622 N
TRIUR3_01653 Triticum urartu TRIUR3_01653 N
TRIUR3_12850 Triticum urartu TRIUR3_12850 N
POPTR_0003s20320 Populus trichocarpa POPTR_0003s20320 N
TRIUR3_23486 Triticum urartu TRIUR3_23486 N
ATBZIP24 Vitis vinifera VIT_13s0158g00380 N
gw1.34.187.1 Physcomitrella patens gw1.34.187.1 N
MDP0000190186 Malus domestica MDP0000190186 N
MDP0000893802 Malus domestica MDP0000893802 N
MDP0000898701 Malus domestica MDP0000898701 N
Pavir.Db00007 Panicum virgatum Pavir.Db00007 N
Pavir.J05283 Panicum virgatum Pavir.J05283 N
Pavir.J21984 Panicum virgatum Pavir.J21984 N
Pavir.J25286 Panicum virgatum Pavir.J25286 N
SapurV1A.0009s0600 Salix purpurea SapurV1A.0009s0600 N
SapurV1A.0445s0220 Salix purpurea SapurV1A.0445s0220 N
OBART11G02390 Oryza barthii OBART11G02390 N
BGIOSGA034759 Oryza indica BGIOSGA034759 N
BRADI1G30140 Brachypodium distachyon BRADI1G30140 N
F775_08202 Aegilops tauschii F775_08202 N
F775_17323 Aegilops tauschii F775_17323 N
F775_29696 Aegilops tauschii F775_29696 N
GLYMA11G16050 Glycine max GLYMA11G16050 N
GRMZM2G000171 Zea mays GRMZM2G000171 N
GRMZM2G055413 Zea mays GRMZM2G055413 N
LPERR06G23100 Leersia perrieri LPERR06G23100 N
MLOC_60894 Hordeum vulgare MLOC_60894 N
OB06G35370 Oryza brachyantha OB06G35370 N
OBART06G27540 Oryza barthii OBART06G27540 N
BGIOSGA020526 Oryza indica BGIOSGA020526 N
OGLUM06G28970 Oryza glumaepatula OGLUM06G28970 N
OLONG_023558 Oryza longistaminata OLONG_023558 N
OMERI06G27590 Oryza meridionalis OMERI06G27590 N
OMERI12G01070 Oryza meridionalis OMERI12G01070 N
ONIVA06G30110 Oryza nivara ONIVA06G30110 N
OPUNC06G25210 Oryza punctata OPUNC06G25210 N
OPUNC12G02170 Oryza punctata OPUNC12G02170 N
ORGLA06G0232500 Oryza glaberrima ORGLA06G0232500 N
ORUFI06G29500 Oryza rufipogon ORUFI06G29500 N
OS06G0716800 Oryza sativa OS06G0716800 N
OS11G0139500 Oryza sativa OS11G0139500 N
POPTR_0001s05750 Populus trichocarpa POPTR_0001s05750 N