PK18009.1 (Cannabis sativa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 PK18009.1 T072893_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18009.1
M01158_2.00		 Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.855 0.774
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.855 0.774
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.855 0.774
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.820 0.661
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.820 0.661
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.820 0.661
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.820 0.661
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.820 0.661
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.820 0.661
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.815 0.645
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.815 0.645
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.805 0.742
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.805 0.742
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.799 0.629
For this family, TFs with SR scores > 0.782 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01158_2.00 bZIP 51 113

DNA Binding Domains

Protein ID Domain From To Sequence
PK18009.1 bZIP 199 261

Links

Other bZIP family TFs
Other Cannabis sativa TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_007074 Theobroma cacao TCM_007074 I 0.872
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.872
MDP0000248567 Malus domestica MDP0000248567 I 0.872
ABF4 Arabidopsis thaliana AT3G19290 D 0.855
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.855
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.855
mgf002047m Mimulus guttatus mgf002047m I 0.853
mgf007524m Mimulus guttatus mgf007524m I 0.853
mgf014602m Mimulus guttatus mgf014602m I 0.853
Bo5g115300 Brassica oleracea Bo5g115300 I 0.849
Bra022409 Brassica rapa Bra022409 I 0.849
Bra037533 Brassica rapa Bra037533 I 0.849
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.849
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.846
TCM_033824 Theobroma cacao TCM_033824 I 0.845
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.841
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.839
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.839
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.839
Bo3g073080 Brassica oleracea Bo3g073080 I 0.836
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.835
Si030114m.g Setaria italica Si030114m.g I 0.835
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.834
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.833
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.833
Si013904m.g Setaria italica Si013904m.g I 0.832
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I 0.832
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.831
Pm021430 Prunus mume Pm021430 I 0.831
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.831
GSMUA_Achr3G07000_001 Musa acuminata GSMUA_Achr3G07000_001 I 0.830
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I 0.829
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.829
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.829
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.827
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.827
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.827
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.827
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.827
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.827
OS09G0456200 Oryza sativa OS09G0456200 I 0.827
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.827
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.827
Cla016272 Citrullus lanatus Cla016272 I 0.827
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.827
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.826
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I 0.826
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.826
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.826
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.826
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.825
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.824
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.824
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.823
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.823
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.823
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.822
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.822
MDP0000296303 Malus domestica MDP0000296303 I 0.822
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.822
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.821
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.821
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.821
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.821
Ca_01548 Cicer arietinum Ca_01548 I 0.821
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.821
PK02169.1 Cannabis sativa PK02169.1 I 0.821
ABF1 Arabidopsis thaliana AT1G49720 D 0.820
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.820
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.820
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.820
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.819
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.819
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I 0.819
30170.m013868 Ricinus communis 30170.m013868 I 0.819
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.819
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.819
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.819
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.819
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.819
OB08G24950 Oryza brachyantha OB08G24950 I 0.817
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.816
ABF3 Arabidopsis thaliana AT4G34000 D 0.815
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.815
29801.m003176 Ricinus communis 29801.m003176 I 0.815
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.815
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.815
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.815
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.815
Cla022926 Citrullus lanatus Cla022926 I 0.814
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.814
mgf020824m Mimulus guttatus mgf020824m I 0.814
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.814
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.814
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.812
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.812
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.812
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.811
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.811
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.811
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.811
BGIOSGA005551 Oryza indica BGIOSGA005551 I 0.810
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.810
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.810
OGLUM02G34210 Oryza glumaepatula OGLUM02G34210 I 0.810
OMERI02G32150 Oryza meridionalis OMERI02G32150 I 0.810
ONIVA02G33490 Oryza nivara ONIVA02G33490 I 0.810
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I 0.810
ORUFI02G35260 Oryza rufipogon ORUFI02G35260 I 0.810
BZIP23 Oryza sativa OS02G0766700 I 0.810
Bo7g116570 Brassica oleracea Bo7g116570 I 0.809
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.809
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.809
OB09G19140 Oryza brachyantha OB09G19140 I 0.809
Lus10027897.g Linum usitatissimum Lus10027897.g I 0.809
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.808
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.808
Bo1g007700 Brassica oleracea Bo1g007700 I 0.807
Bo1g114840 Brassica oleracea Bo1g114840 I 0.807
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.806
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.806
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.806
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.806
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.806
TRIUR3_26781 Triticum urartu TRIUR3_26781 I 0.806
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.806
ABF2 Arabidopsis thaliana AT1G45249 D 0.805
Bo6g006970 Brassica oleracea Bo6g006970 I 0.805
Bra040260 Brassica rapa Bra040260 I 0.805
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.805
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.805
OBART02G33770 Oryza barthii OBART02G33770 I 0.805
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.805
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.805
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.805
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.803
F775_32479 Aegilops tauschii F775_32479 I 0.802
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.802
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.802
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.802
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.802
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.801
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.800
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.800
MTR_4g085910 Medicago truncatula MTR_4g085910 I 0.800
OB01G46760 Oryza brachyantha OB01G46760 I 0.800
OBART01G37980 Oryza barthii OBART01G37980 I 0.800
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.800
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.800
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.800
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.800
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.800
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.800
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.800
ORUFI12G20810 Oryza rufipogon ORUFI12G20810 I 0.800
OS01G0859300 Oryza sativa OS01G0859300 I 0.800
BZIP46 Oryza sativa OS06G0211200 I 0.800
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.800
Pm005288 Prunus mume Pm005288 I 0.800
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.800
GLYMA07G33600 Glycine max GLYMA07G33600 I 0.799
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.799
OS08G0471950 Oryza sativa OS08G0471950 D 0.799
Si017618m.g Setaria italica Si017618m.g I 0.799
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.799
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I 0.798
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I 0.798
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I 0.798
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.797
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.797
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.797
29625.m000702 Ricinus communis 29625.m000702 I 0.797
30055.m001548 Ricinus communis 30055.m001548 I 0.797
cassava16074.m1 Manihot esculenta cassava16074.m1 I 0.797
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.797
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.797
Ca_06458 Cicer arietinum Ca_06458 I 0.796
Eucgr.I01145 Eucalyptus grandis Eucgr.I01145 I 0.796
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.795
ABI5 Arabidopsis thaliana AT2G36270 D 0.794
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.794
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.794
cassava32856.m1 Manihot esculenta cassava32856.m1 I 0.794
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.794
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.793
BRADI4G32090 Brachypodium distachyon BRADI4G32090 I 0.792
TRIUR3_33995 Triticum urartu TRIUR3_33995 I 0.792
Cucsa.241090 Cucumis sativus Cucsa.241090 I 0.791
Carubv10009399m.g Capsella rubella Carubv10009399m.g I 0.791
BGIOSGA022536 Oryza indica BGIOSGA022536 I 0.790
BGIOSGA040605 Oryza indica BGIOSGA040605 I 0.790
Bra018800 Brassica rapa Bra018800 I 0.790
LPERR02G27610 Leersia perrieri LPERR02G27610 I 0.790
LPERR06G06440 Leersia perrieri LPERR06G06440 I 0.790
OB02G40680 Oryza brachyantha OB02G40680 I 0.790
OB06G16510 Oryza brachyantha OB06G16510 I 0.790
OBART06G07070 Oryza barthii OBART06G07070 I 0.790
OGLUM06G07500 Oryza glumaepatula OGLUM06G07500 I 0.790
OMERI06G08210 Oryza meridionalis OMERI06G08210 I 0.790
ONIVA06G08350 Oryza nivara ONIVA06G08350 I 0.790
OPUNC06G06690 Oryza punctata OPUNC06G06690 I 0.790
ORGLA06G0066000 Oryza glaberrima ORGLA06G0066000 I 0.790
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I 0.790
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.790
MDP0000701734 Malus domestica MDP0000701734 I 0.790
Bra011485 Brassica rapa Bra011485 I 0.789
TCM_022574 Theobroma cacao TCM_022574 I 0.789
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I 0.789
Lus10021369.g Linum usitatissimum Lus10021369.g I 0.789
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.788
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.788
mgf002176m Mimulus guttatus mgf002176m I 0.788
Lus10009755.g Linum usitatissimum Lus10009755.g I 0.788
Bo6g018480 Brassica oleracea Bo6g018480 I 0.787
Pm001315 Prunus mume Pm001315 I 0.787
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I 0.787
GRMZM2G033413 Zea mays GRMZM2G033413 I 0.786
Si006889m.g Setaria italica Si006889m.g I 0.786
Lus10006489.g Linum usitatissimum Lus10006489.g I 0.786
Lus10017049.g Linum usitatissimum Lus10017049.g I 0.786
Pavir.Da01931 Panicum virgatum Pavir.Da01931 I 0.786
OBART08G17810 Oryza barthii OBART08G17810 I 0.785
cassava17300.m1 Manihot esculenta cassava17300.m1 I 0.785
MTR_7g104480 Medicago truncatula MTR_7g104480 I 0.784
OPUNC01G36800 Oryza punctata OPUNC01G36800 I 0.784
Ca_00791 Cicer arietinum Ca_00791 I 0.784
ABI5 Populus trichocarpa POPTR_0006s08300 I 0.783
DPBF2 Vitis vinifera VIT_06s0080g00340 I 0.783