Carubv10017372m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10017372m.g T071576_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05128.1
M01154_2.00 		Cannabis sativa
NNNDBGTRKN
NMYACVHNNN		 PBM
Lambert et al.(2019)
pTH10099 		0.792 0.714
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10017372m bZIP 227 289

Links

Other bZIP family TFs
Other Capsella rubella TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK05128.1 Cannabis sativa PK05128.1 D 0.792
Cla015037 Citrullus lanatus Cla015037 I 0.783
PK11472.1 Cannabis sativa PK11472.1 I 0.822
Thhalv10010426m.g Eutrema salsugineum Thhalv10010426m.g I 0.910
MDP0000176747 Malus domestica MDP0000176747 I 0.789
Lus10018759.g Linum usitatissimum Lus10018759.g I 0.807
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I 0.792
evm.TU.supercontig_52.101 Carica papaya evm.TU.supercontig_52.101 I 0.807
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I 0.788
Cagra.0562s0051 Capsella grandiflora Cagra.0562s0051 I 0.910
Bostr.0697s0074 Boechera stricta Bostr.0697s0074 I 0.910
Cucsa.388800 Cucumis sativus Cucsa.388800 I 0.783
Pm020231 Prunus mume Pm020231 I 0.816
BZIP25 Arabidopsis thaliana AT3G54620 I 0.910
Ca_03753 Cicer arietinum Ca_03753 I 0.792
PRUPE_ppa005367mg Prunus persica PRUPE_ppa005367mg I 0.816
GSMUA_Achr7G07650_001 Musa acuminata GSMUA_Achr7G07650_001 I 0.787
Bra024310 Brassica rapa Bra024310 I 0.904
Bra014802 Brassica rapa Bra014802 I 0.908
Bra007083 Brassica rapa Bra007083 I 0.904
Bra000102 Brassica rapa Bra000102 I 0.805
Bo8g084770 Brassica oleracea Bo8g084770 I 0.903
Bo4g119810 Brassica oleracea Bo4g119810 I 0.908
ATBZIP25 Arabidopsis lyrata scaffold_502576.1 N 0.896
Bo3g032910 Brassica oleracea Bo3g032910 N 0.876