Carubv10019243m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10019243m.g T071584_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK24205.1
M01161_2.00 		Cannabis sativa
NCACGTGKCN
NGMCACGTGN		 PBM
Lambert et al.(2019)
pTH10152 		0.796 0.603
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10019243m bZIP 253 310

Links

Other bZIP family TFs
Other Capsella rubella TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK24205.1 Cannabis sativa PK24205.1 D 0.796
DPBF2 Arabidopsis thaliana AT3G44460 I 0.858
Bo3g122120 Brassica oleracea Bo3g122120 I 0.855
Bra019436 Brassica rapa Bra019436 I 0.821
BRADI2G55550 Brachypodium distachyon BRADI2G55550 I 0.808
DPBF2 Arabidopsis lyrata fgenesh2_kg.5__854__AT3G44460.1 I 0.858
MTR_6g026800 Medicago truncatula MTR_6g026800 I 0.784
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I 0.784
30055.m001548 Ricinus communis 30055.m001548 I 0.784
cassava16074.m1 Manihot esculenta cassava16074.m1 I 0.783
Bostr.0556s0737 Boechera stricta Bostr.0556s0737 I 0.858
Cagra.2192s0012 Capsella grandiflora Cagra.2192s0012 I 0.858
Gorai.013G258300 Gossypium raimondii Gorai.013G258300 I 0.788
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I 0.784
Thhalv10011159m.g Eutrema salsugineum Thhalv10011159m.g I 0.828