CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10021345m.g
(
Capsella rubella
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Carubv10021345m.g
T071589_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10021345m
bZIP
164
219
SSEQRTLRRLAQNREAARKSRLRKKAYVQQLENSRIRLAQLEEELKRVRQQGNLAE
Links
Other
bZIP
family TFs
Other
Capsella rubella
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LYL1
Homo sapiens
ENSG00000104903
D
0.000
TAL1
Homo sapiens
ENSG00000162367
D
0.000
Tal1
Mus musculus
ENSMUSG00000028717
D
0.000
Lyl1
Mus musculus
ENSMUSG00000034041
D
0.000
CpipJ_CPIJ014602
Culex pipiens
CpipJ_CPIJ014602
I
0.000
AAEL010472
Aedes aegypti
AAEL010472
I
0.000
ACEP26870
Atta cephalotes
ACEP26870
I
0.000
BGIBMGA013959
Bombyx mori
BGIBMGA013959
I
0.000
CapteG49381
Capitella teleta
CapteG49381
I
0.000
CPIJ014602
Culex quinquefasciatus
CPIJ014602
I
0.000
TAL2
Anolis carolinensis
ENSACAG00000004545
I
0.000
ENSACAG00000005980
Anolis carolinensis
ENSACAG00000005980
I
0.000
ENSACAG00000017046
Anolis carolinensis
ENSACAG00000017046
I
0.000
ENSAMEG00000000014
Ailuropoda melanoleuca
ENSAMEG00000000014
I
0.000
ENSAMEG00000012594
Ailuropoda melanoleuca
ENSAMEG00000012594
I
0.000
ENSAMEG00000019057
Ailuropoda melanoleuca
ENSAMEG00000019057
I
0.000
ENSAMXG00000011388
Astyanax mexicanus
ENSAMXG00000011388
I
0.000
ENSAMXG00000017924
Astyanax mexicanus
ENSAMXG00000017924
I
0.000
ENSAMXG00000025213
Astyanax mexicanus
ENSAMXG00000025213
I
0.000
ENSAPLG00000000896
Anas platyrhynchos
ENSAPLG00000000896
I
0.000
TAL1
Bos taurus
ENSBTAG00000005029
I
0.000
LYL1
Bos taurus
ENSBTAG00000019329
I
0.000
TAL2
Bos taurus
ENSBTAG00000045852
I
0.000
TAL1
Canis familiaris
ENSCAFG00000004032
I
0.000
TAL2
Canis familiaris
ENSCAFG00000032112
I
0.000
TAL1
Callithrix jacchus
ENSCJAG00000021222
I
0.000
TAL2
Callithrix jacchus
ENSCJAG00000022534
I
0.000
ENSCPOG00000003558
Cavia porcellus
ENSCPOG00000003558
I
0.000
ENSCPOG00000008197
Cavia porcellus
ENSCPOG00000008197
I
0.000
ENSCPOG00000024157
Cavia porcellus
ENSCPOG00000024157
I
0.000
ENSCSAG00000000466
Chlorocebus sabaeus
ENSCSAG00000000466
I
0.000
ENSCSAG00000001247
Chlorocebus sabaeus
ENSCSAG00000001247
I
0.000
ENSCSAG00000006504
Chlorocebus sabaeus
ENSCSAG00000006504
I
0.000
tal1
Danio rerio
ENSDARG00000019930
I
0.000
tal2
Danio rerio
ENSDARG00000042041
I
0.000
CABZ01066696.1
Danio rerio
ENSDARG00000091603
I
0.000
TAL2
Dasypus novemcinctus
ENSDNOG00000006670
I
0.000
ENSDNOG00000043562
Dasypus novemcinctus
ENSDNOG00000043562
I
0.000
TAL1
Dasypus novemcinctus
ENSDNOG00000047501
I
0.000
ENSDORG00000004570
Dipodomys ordii
ENSDORG00000004570
I
0.000
Tal2
Dipodomys ordii
ENSDORG00000012882
I
0.000
TAL2
Equus caballus
ENSECAG00000004995
I
0.000
ENSECAG00000018746
Equus caballus
ENSECAG00000018746
I
0.000
TAL2
Erinaceus europaeus
ENSEEUG00000003187
I
0.000
TAL2
Echinops telfairi
ENSETEG00000007386
I
0.000
ENSETEG00000008816
Echinops telfairi
ENSETEG00000008816
I
0.000
ENSFALG00000009303
Ficedula albicollis
ENSFALG00000009303
I
0.000
ENSFALG00000015243
Ficedula albicollis
ENSFALG00000015243
I
0.000
TAL2
Felis catus
ENSFCAG00000008052
I
0.000
ENSFCAG00000031106
Felis catus
ENSFCAG00000031106
I
0.000
TAL2
Homo sapiens
ENSG00000186051
I
0.000
tal1
Gasterosteus aculeatus
ENSGACG00000013846
I
0.000
tal2
Gasterosteus aculeatus
ENSGACG00000013904
I
0.000
tal1
Gasterosteus aculeatus
ENSGACG00000019476
I
0.000
TAL2
Gallus gallus
ENSGALG00000023114
I
0.000
TAL1
Gallus gallus
ENSGALG00000023296
I
0.000
TAL2
Gorilla gorilla
ENSGGOG00000006780
I
0.000
TAL1
Gorilla gorilla
ENSGGOG00000011776
I
0.000
LYL1
Gorilla gorilla
ENSGGOG00000023512
I
0.000
ENSGMOG00000005856
Gadus morhua
ENSGMOG00000005856
I
0.000
ENSGMOG00000012044
Gadus morhua
ENSGMOG00000012044
I
0.000
ENSGMOG00000019785
Gadus morhua
ENSGMOG00000019785
I
0.000
ENSLACG00000011366
Latimeria chalumnae
ENSLACG00000011366
I
0.000
ENSLACG00000017036
Latimeria chalumnae
ENSLACG00000017036
I
0.000
LYL1
Loxodonta africana
ENSLAFG00000005235
I
0.000
TAL2
Loxodonta africana
ENSLAFG00000008309
I
0.000
TAL1
Loxodonta africana
ENSLAFG00000013880
I
0.000
ENSLOCG00000007669
Lepisosteus oculatus
ENSLOCG00000007669
I
0.000
ENSLOCG00000009966
Lepisosteus oculatus
ENSLOCG00000009966
I
0.000
ENSLOCG00000017967
Lepisosteus oculatus
ENSLOCG00000017967
I
0.000
ENSMEUG00000008559
Macropus eugenii
ENSMEUG00000008559
I
0.000
ENSMEUG00000011615
Macropus eugenii
ENSMEUG00000011615
I
0.000
ENSMGAG00000010823
Meleagris gallopavo
ENSMGAG00000010823
I
0.000
ENSMICG00000001720
Microcebus murinus
ENSMICG00000001720
I
0.000
ENSMLUG00000006388
Myotis lucifugus
ENSMLUG00000006388
I
0.000
TAL2
Myotis lucifugus
ENSMLUG00000008792
I
0.000
LYL1
Myotis lucifugus
ENSMLUG00000012805
I
0.000
LYL1
Macaca mulatta
ENSMMUG00000001166
I
0.000
TAL2
Macaca mulatta
ENSMMUG00000002671
I
0.000
ENSMMUG00000017870
Macaca mulatta
ENSMMUG00000017870
I
0.000
TAL1
Monodelphis domestica
ENSMODG00000001502
I
0.000
LYL1
Monodelphis domestica
ENSMODG00000011593
I
0.000
TAL2
Monodelphis domestica
ENSMODG00000022957
I
0.000
ENSMPUG00000004316
Mustela putorius furo
ENSMPUG00000004316
I
0.000
ENSMPUG00000012410
Mustela putorius furo
ENSMPUG00000012410
I
0.000
ENSNLEG00000013010
Nomascus leucogenys
ENSNLEG00000013010
I
0.000
ENSNLEG00000016398
Nomascus leucogenys
ENSNLEG00000016398
I
0.000
ENSNLEG00000018969
Nomascus leucogenys
ENSNLEG00000018969
I
0.000
TAL2
Ornithorhynchus anatinus
ENSOANG00000004194
I
0.000
LYL1
Ornithorhynchus anatinus
ENSOANG00000006846
I
0.000
ENSOARG00000003039
Ovis aries
ENSOARG00000003039
I
0.000
ENSOARG00000003450
Ovis aries
ENSOARG00000003450
I
0.000
ENSOARG00000009454
Ovis aries
ENSOARG00000009454
I
0.000
TAL1
Oryctolagus cuniculus
ENSOCUG00000017248
I
0.000
TAL2
Otolemur garnettii
ENSOGAG00000009225
I
0.000
ENSOGAG00000016551
Otolemur garnettii
ENSOGAG00000016551
I
0.000
LYL1
Otolemur garnettii
ENSOGAG00000033339
I
0.000
ENSONIG00000009960
Oreochromis niloticus
ENSONIG00000009960
I
0.000
ENSONIG00000018071
Oreochromis niloticus
ENSONIG00000018071
I
0.000
ENSONIG00000021296
Oreochromis niloticus
ENSONIG00000021296
I
0.000
TAL1
Ochotona princeps
ENSOPRG00000004033
I
0.000
LYL1
Ochotona princeps
ENSOPRG00000009458
I
0.000
TAL2
Ochotona princeps
ENSOPRG00000013838
I
0.000
tal2
Oryzias latipes
ENSORLG00000000466
I
0.000
tal1
Oryzias latipes
ENSORLG00000003776
I
0.000
ENSORLG00000013953
Oryzias latipes
ENSORLG00000013953
I
0.000
tal1
Oryzias latipes
ENSORLG00000016044
I
0.000
ENSPANG00000009893
Papio anubis
ENSPANG00000009893
I
0.000
ENSPANG00000014670
Papio anubis
ENSPANG00000014670
I
0.000
ENSPANG00000017357
Papio anubis
ENSPANG00000017357
I
0.000
LYL1
Procavia capensis
ENSPCAG00000003676
I
0.000
TAL2
Procavia capensis
ENSPCAG00000004449
I
0.000
TAL1
Procavia capensis
ENSPCAG00000006179
I
0.000
ENSPFOG00000005195
Poecilia formosa
ENSPFOG00000005195
I
0.000
ENSPFOG00000013394
Poecilia formosa
ENSPFOG00000013394
I
0.000
ENSPFOG00000020678
Poecilia formosa
ENSPFOG00000020678
I
0.000
ENSPMAG00000002259
Petromyzon marinus
ENSPMAG00000002259
I
0.000
ENSPPYG00000009621
Pongo abelii
ENSPPYG00000009621
I
0.000
ENSPSIG00000000318
Pelodiscus sinensis
ENSPSIG00000000318
I
0.000
ENSPSIG00000010614
Pelodiscus sinensis
ENSPSIG00000010614
I
0.000
TAL1
Pan troglodytes
ENSPTRG00000000710
I
0.000
TAL2
Pan troglodytes
ENSPTRG00000021225
I
0.000
ENSPVAG00000005351
Pteropus vampyrus
ENSPVAG00000005351
I
0.000
TAL2
Pteropus vampyrus
ENSPVAG00000005744
I
0.000
LYL1
Pteropus vampyrus
ENSPVAG00000015075
I
0.000
Lyl1
Rattus norvegicus
ENSRNOG00000002950
I
0.000
Tal1
Rattus norvegicus
ENSRNOG00000025051
I
0.000
ENSSHAG00000010681
Sarcophilus harrisii
ENSSHAG00000010681
I
0.000
ENSSHAG00000014421
Sarcophilus harrisii
ENSSHAG00000014421
I
0.000
ENSSHAG00000015614
Sarcophilus harrisii
ENSSHAG00000015614
I
0.000
ENSSSCG00000013743
Sus scrofa
ENSSSCG00000013743
I
0.000
ENSSSCG00000026460
Sus scrofa
ENSSSCG00000026460
I
0.000
ENSSTOG00000008396
Ictidomys tridecemlineatus
ENSSTOG00000008396
I
0.000
ENSSTOG00000026950
Ictidomys tridecemlineatus
ENSSTOG00000026950
I
0.000
ENSSTOG00000028401
Ictidomys tridecemlineatus
ENSSTOG00000028401
I
0.000
ENSTGUG00000006333
Taeniopygia guttata
ENSTGUG00000006333
I
0.000
TAL1
Taeniopygia guttata
ENSTGUG00000008542
I
0.000
ENSTGUG00000018537
Taeniopygia guttata
ENSTGUG00000018537
I
0.000
tal1
Tetraodon nigroviridis
ENSTNIG00000001525
I
0.000
tal1
Tetraodon nigroviridis
ENSTNIG00000006133
I
0.000
ENSTRUG00000004487
Takifugu rubripes
ENSTRUG00000004487
I
0.000
tal1
Takifugu rubripes
ENSTRUG00000008218
I
0.000
tal2
Takifugu rubripes
ENSTRUG00000016731
I
0.000
ENSTSYG00000009754
Tarsius syrichta
ENSTSYG00000009754
I
0.000
TAL2
Tursiops truncatus
ENSTTRG00000003494
I
0.000
LYL1
Tursiops truncatus
ENSTTRG00000006376
I
0.000
TAL1
Tursiops truncatus
ENSTTRG00000011653
I
0.000
TAL1
Vicugna pacos
ENSVPAG00000004268
I
0.000
ENSXMAG00000007215
Xiphophorus maculatus
ENSXMAG00000007215
I
0.000
ENSXMAG00000015686
Xiphophorus maculatus
ENSXMAG00000015686
I
0.000
ENSXMAG00000020363
Xiphophorus maculatus
ENSXMAG00000020363
I
0.000
HLH3B
Drosophila melanogaster
FBgn0011276
I
0.000
GA15411
Drosophila pseudoobscura
FBgn0075429
I
0.000
GF21374
Drosophila ananassae
FBgn0098376
I
0.000
GG18617
Drosophila erecta
FBgn0110828
I
0.000
GH24106
Drosophila grimshawi
FBgn0131562
I
0.000
GI14376
Drosophila mojavensis
FBgn0137128
I
0.000
GL26737
Drosophila persimilis
FBgn0164318
I
0.000
GD24607
Drosophila simulans
FBgn0195935
I
0.000
GJ19415
Drosophila virilis
FBgn0206558
I
0.000
GK10268
Drosophila willistoni
FBgn0212283
I
0.000
GE16932
Drosophila yakuba
FBgn0234420
I
0.000
GB40906
Apis mellifera
GB40906
I
0.000
HelroG81338
Helobdella robusta
HelroG81338
I
0.000
ISCW010324
Ixodes scapularis
ISCW010324
I
0.000
KGM_01922
Danaus plexippus
KGM_01922
I
0.000
L798_06639
Zootermopsis nevadensis
L798_06639
I
0.000
MCINX015509
Melitaea cinxia
MCINX015509
I
0.000
NV24799
Nasonia vitripennis
NV24799
I
0.000
SINV21956
Solenopsis invicta
SINV21956
I
0.000
SMAR000405
Strigamia maritima
SMAR000405
I
0.000
TC009117
Tribolium castaneum
TC009117
I
0.000
Aan_R000747
Calypte anna
Aan_R000747
I
0.000
Afo_R000995
Aptenodytes forsteri
Afo_R000995
I
0.000
Afo_R010378
Aptenodytes forsteri
Afo_R010378
I
0.000
Alligator_sinensis_CCG015253.1
Alligator sinensis
Alligator_sinensis_CCG015253.1
I
0.000
Alligator_sinensis_CCG019028.1
Alligator sinensis
Alligator_sinensis_CCG019028.1
I
0.000
Brh_R004046
Buceros rhinoceros
Brh_R004046
I
0.000
Brh_R008908
Buceros rhinoceros
Brh_R008908
I
0.000
Cflo_01951--XP_001121011.1_APIME
Camponotus floridanus
Cflo_01951--XP_001121011.1_APIME
I
0.000
Cmyd_10006869
Chelonia mydas
Cmyd_10006869
I
0.000
Cmyd_10010656
Chelonia mydas
Cmyd_10010656
I
0.000
ENSBTAP00000025739-D1
Bos grunniens
ENSBTAP00000025739-D1
I
0.000
ENSP00000334547-D1
Bos grunniens
ENSP00000334547-D1
I
0.000
ENSP00000334547
Macaca fascicularis
ENSP00000334547
I
0.000
ENSP00000360950-D1
Bos grunniens
ENSP00000360950-D1
I
0.000
ENSP00000360950
Macaca fascicularis
ENSP00000360950
I
0.000
Gfo_R006237
Geospiza fortis
Gfo_R006237
I
0.000
Gfo_R009231
Geospiza fortis
Gfo_R009231
I
0.000
Hsal_07700--XP_001121011.1_APIME
Harpegnathos saltator
Hsal_07700--XP_001121011.1_APIME
I
0.000
Myotis_brandtii_LYL1_10009227
Myotis brandtii
Myotis_brandtii_LYL1_10009227
I
0.000
Myotis_brandtii_TAL1_10003055
Myotis brandtii
Myotis_brandtii_TAL1_10003055
I
0.000
Myotis_brandtii_TMEM38B_10031594
Myotis brandtii
Myotis_brandtii_TMEM38B_10031594
I
0.000
Ogr06402
Ophisaurus gracilis
Ogr06402
I
0.000
Ogr13537
Ophisaurus gracilis
Ogr13537
I
0.000
Ogr15798
Ophisaurus gracilis
Ogr15798
I
0.000
Pvit_02813
Pogona vitticeps
Pvit_02813
I
0.000
Pvit_09175
Pogona vitticeps
Pvit_09175
I
0.000
Pvit_14582
Pogona vitticeps
Pvit_14582
I
0.000
Tal_R009538
Tyto alba
Tal_R009538
I
0.000
gw.349.31.1
Branchiostoma floridae
gw.349.31.1
I
0.000
Sakowv30007933m.g
Saccoglossus kowalevskii
Sakowv30007933m.g
I
0.000
LDEC012804
Leptinotarsa decemlineata
LDEC012804
I
0.000
tal1
Xenopus tropicalis
XB-GENE-479827
I
0.000
tal1.S
Xenopus laevis
XB-GENE-865312
I
0.000
lyl1
Xenopus tropicalis
XB-GENE-940268
I
0.000
tal2
Xenopus tropicalis
XB-GENE-965184
I
0.000
AALB003178
Anopheles albimanus
AALB003178
I
0.000
AARA011500
Anopheles arabiensis
AARA011500
I
0.000
ACHR000367
Anopheles christyi
ACHR000367
I
0.000
ACOM033000
Anopheles coluzzii
ACOM033000
I
0.000
ACUA016345
Anopheles culicifacies
ACUA016345
I
0.000
ADIR002616
Anopheles dirus
ADIR002616
I
0.000
AEPI003935
Anopheles epiroticus
AEPI003935
I
0.000
AFAF009626
Anopheles farauti
AFAF009626
I
0.000
AFUN001469
Anopheles funestus
AFUN001469
I
0.000
AMAM004582
Anopheles maculatus
AMAM004582
I
0.000
AMEC016032
Anopheles melas
AMEC016032
I
0.000
AMEM008015
Anopheles merus
AMEM008015
I
0.000
AMIN002999
Anopheles minimus
AMIN002999
I
0.000
AQUA006236
Anopheles quadriannulatus
AQUA006236
I
0.000
ASTEI11387
Anopheles stephensi
ASTEI11387
I
0.000
BGLB003718
Biomphalaria glabrata
BGLB003718
I
0.000
LLOJ006043
Lutzomyia longipalpis
LLOJ006043
I
0.000