Ciclev10008515m.g (Citrus clementina)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Ciclev10008515m.g T071628_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05128.1
M01154_2.00 		Cannabis sativa
NNNDBGTRKN
NMYACVHNNN		 PBM
Lambert et al.(2019)
pTH10099 		0.807 0.635
OS02G0266800
M10046_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RITA1_01 		0.806 0.698
CPRF2_PETCR
M10069_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_01 		0.785 0.587
CPRF2_PETCR
M10070_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_Q2 		0.785 0.587
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10008515m bZIP 215 277
Ciclev10009055m bZIP 111 173
Ciclev10009058m bZIP 111 173

Links

Other bZIP family TFs
Other Citrus clementina TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BZIP63 Arabidopsis thaliana AT5G28770 D
PK05128.1 Cannabis sativa PK05128.1 D 0.807
CPRF2_PETCR Petroselinum crispum CPRF2_PETCR D 0.785
estExt_Genewise1.C_2060077 Physcomitrella patens estExt_Genewise1.C_2060077 D
Cagra.5456s0001 Capsella grandiflora Cagra.5456s0001 I
Cla020112 Citrullus lanatus Cla020112 I 0.843
Bostr.25517s0001 Boechera stricta Bostr.25517s0001 I
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I 0.788
mgf012838m Mimulus guttatus mgf012838m I 0.800
mgf009803m Mimulus guttatus mgf009803m I 0.789
gw1.220.22.1 Physcomitrella patens gw1.220.22.1 I 0.789
estExt_fgenesh1_pg.C_2060068 Physcomitrella patens estExt_fgenesh1_pg.C_2060068 I
Cucsa.388800 Cucumis sativus Cucsa.388800 I 0.796
Cucsa.289120 Cucumis sativus Cucsa.289120 I 0.808
Cucsa.133290 Cucumis sativus Cucsa.133290 I 0.843
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I 0.790
cassava18571.valid.m1 Manihot esculenta cassava18571.valid.m1 I
29598.m000468 Ricinus communis 29598.m000468 I 0.789
PK09738.1 Cannabis sativa PK09738.1 I 0.818
Lus10015913.g Linum usitatissimum Lus10015913.g I 0.793
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I 0.803
Thhalv10004611m.g Eutrema salsugineum Thhalv10004611m.g I
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I 0.789
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I 0.792
Pavir.Ca02738 Panicum virgatum Pavir.Ca02738 I
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I 0.806
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I 0.792
MDP0000270365 Malus domestica MDP0000270365 I 0.786
Carubv10001450m.g Capsella rubella Carubv10001450m.g I
Lus10006590.g Linum usitatissimum Lus10006590.g I 0.801
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I 0.803
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I 0.807
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I 0.792
Eucgr.H04338 Eucalyptus grandis Eucgr.H04338 I 0.788
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I 0.806
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I 0.802
GLYMA10G30410 Glycine max GLYMA10G30410 I
OBART12G18120 Oryza barthii OBART12G18120 I
MTR_7g115120 Medicago truncatula MTR_7g115120 I
MTR_1g080920 Medicago truncatula MTR_1g080920 I 0.790
LPERR12G15130 Leersia perrieri LPERR12G15130 I 0.785
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I 0.792
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I 0.803
GLYMA20G36750 Glycine max GLYMA20G36750 I
GLYMA19G43420 Glycine max GLYMA19G43420 I 0.792
OGLUM12G19660 Oryza glumaepatula OGLUM12G19660 I
GLYMA03G40730 Glycine max GLYMA03G40730 I 0.792
BZO2H3 Arabidopsis lyrata fgenesh2_kg.6__2797__AT5G28770.2 I 0.784
Bra020620 Brassica rapa Bra020620 I
Bra010010 Brassica rapa Bra010010 I 0.788
Bo7g093030 Brassica oleracea Bo7g093030 I
Bo2g151850 Brassica oleracea Bo2g151850 I
BGIOSGA037742 Oryza indica BGIOSGA037742 I
PRUPE_ppa005585mg Prunus persica PRUPE_ppa005585mg I
Cla011478 Citrullus lanatus Cla011478 I 0.787
Ca_03753 Cicer arietinum Ca_03753 I 0.807
Ca_01234 Cicer arietinum Ca_01234 I
BZO2H3 Vitis vinifera VIT_14s0030g02200 I 0.792
TCM_026349 Theobroma cacao TCM_026349 I 0.789
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I 0.792
Sb08g020600 Sorghum bicolor Sb08g020600 I
Cla015037 Citrullus lanatus Cla015037 I 0.796
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I 0.792
POPTR_0005s05470 Populus trichocarpa POPTR_0005s05470 I
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I 0.792
OS12G0601800 Oryza sativa OS12G0601800 I
ORUFI12G20050 Oryza rufipogon ORUFI12G20050 I
OPUNC12G16360 Oryza punctata OPUNC12G16360 I 0.785
ONIVA12G16860 Oryza nivara ONIVA12G16860 I
BRADI4G02570 Brachypodium distachyon BRADI4G02570 N
OLONG_006713 Oryza longistaminata OLONG_006713 N