CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.013G172500
(
Gossypium raimondii
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Gorai.013G172500
T071995_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.013G172500.1
bZIP
177
237
DPKRVKRILANRQSAQRSRVRKLQYISQLERSVTTLQTEVSALSPRVAFLDHQRLILNVDN
Gorai.013G172500.2
bZIP
177
219
DPKRVKRILANRQSAQRSRVRKLQYISQLERSVTTLQVHIHTC
Gorai.013G172500.3
bZIP
177
233
DPKRVKRILANRQSAQRSRVRKLQYISQLERSVTTLQTEVSALSPRVAFLDHQRLIL
Links
Other
bZIP
family TFs
Other
Gossypium raimondii
TFs
104 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC233853.1_FG002
Zea mays
AC233853.1_FG002
N
0.807
BZIP34
Arabidopsis thaliana
AT2G42380
N
0.841
BZIP61
Arabidopsis thaliana
AT3G58120
N
0.841
BGIOSGA007886
Oryza indica
BGIOSGA007886
N
0.807
Bo6g074510
Brassica oleracea
Bo6g074510
N
0.841
Bo8g092430
Brassica oleracea
Bo8g092430
N
0.841
Bra000256
Brassica rapa
Bra000256
N
0.817
Bra003320
Brassica rapa
Bra003320
N
0.841
Bra007380
Brassica rapa
Bra007380
N
0.799
BRADI2G06790
Brachypodium distachyon
BRADI2G06790
N
0.807
BRADI3G09340
Brachypodium distachyon
BRADI3G09340
N
0.786
F775_31528
Aegilops tauschii
F775_31528
N
0.786
ATBZIP34
Arabidopsis lyrata
fgenesh2_kg.4__2390__AT2G42380.2
N
0.841
ATBZIP61
Arabidopsis lyrata
fgenesh2_kg.5__2254__AT3G58120.1
N
0.799
GLYMA06G43760
Glycine max
GLYMA06G43760
N
0.799
GLYMA12G33600
Glycine max
GLYMA12G33600
N
0.799
GLYMA13G34770
Glycine max
GLYMA13G34770
N
0.856
GLYMA13G36870
Glycine max
GLYMA13G36870
N
0.799
GRMZM2G158313
Zea mays
GRMZM2G158313
N
0.786
GSMUA_Achr4G10560_001
Musa acuminata
GSMUA_Achr4G10560_001
N
0.782
GSMUA_Achr6G26930_001
Musa acuminata
GSMUA_Achr6G26930_001
N
0.807
GSMUA_Achr9G06540_001
Musa acuminata
GSMUA_Achr9G06540_001
N
0.807
LPERR01G06720
Leersia perrieri
LPERR01G06720
N
0.807
MLOC_39203
Hordeum vulgare
MLOC_39203
N
0.786
MLOC_72368
Hordeum vulgare
MLOC_72368
N
0.807
MTR_4g079500
Medicago truncatula
MTR_4g079500
N
0.841
OB01G17130
Oryza brachyantha
OB01G17130
N
0.807
OBART01G07120
Oryza barthii
OBART01G07120
N
0.807
OBART02G10550
Oryza barthii
OBART02G10550
N
0.807
OGLUM01G08020
Oryza glumaepatula
OGLUM01G08020
N
0.807
OGLUM02G10470
Oryza glumaepatula
OGLUM02G10470
N
0.807
OLONG_003093
Oryza longistaminata
OLONG_003093
N
0.807
OMERI02G11410
Oryza meridionalis
OMERI02G11410
N
0.807
ONIVA01G09160
Oryza nivara
ONIVA01G09160
N
0.807
ONIVA02G11660
Oryza nivara
ONIVA02G11660
N
0.807
OPUNC01G06850
Oryza punctata
OPUNC01G06850
N
0.807
OPUNC01G30390
Oryza punctata
OPUNC01G30390
N
0.786
OPUNC02G09400
Oryza punctata
OPUNC02G09400
N
0.807
ORGLA02G0094900
Oryza glaberrima
ORGLA02G0094900
N
0.807
ORUFI01G07680
Oryza rufipogon
ORUFI01G07680
N
0.807
ORUFI02G10470
Oryza rufipogon
ORUFI02G10470
N
0.807
BZIP02
Oryza sativa
OS01G0211800
N
0.807
PGSC0003DMG400012436
Solanum tuberosum
PGSC0003DMG400012436
N
0.786
POPTR_0013s12810
Populus trichocarpa
POPTR_0013s12810
N
0.799
PRUPE_ppa016271mg
Prunus persica
PRUPE_ppa016271mg
N
0.841
PRUPE_ppa022385mg
Prunus persica
PRUPE_ppa022385mg
N
0.856
Sb03g002050
Sorghum bicolor
Sb03g002050
N
0.807
Sb04g008840
Sorghum bicolor
Sb04g008840
N
0.786
Si002311m.g
Setaria italica
Si002311m.g
N
0.786
Si018161m.g
Setaria italica
Si018161m.g
N
0.786
Solyc07g053450.2
Solanum lycopersicum
Solyc07g053450.2
N
0.841
Solyc07g062710.2
Solanum lycopersicum
Solyc07g062710.2
N
0.856
Solyc12g010800.1
Solanum lycopersicum
Solyc12g010800.1
N
0.837
TCM_003607
Theobroma cacao
TCM_003607
N
0.841
TCM_031686
Theobroma cacao
TCM_031686
N
0.856
Traes_2BS_C9A338257
Triticum aestivum
Traes_2BS_C9A338257
N
0.807
TRAES3BF117100130CFD_g
Triticum aestivum
TRAES3BF117100130CFD_g
N
0.783
Traes_5BL_573ABF1D7
Triticum aestivum
Traes_5BL_573ABF1D7
N
0.786
Traes_5DL_D30ADBFDE
Triticum aestivum
Traes_5DL_D30ADBFDE
N
0.786
VIT_12s0028g02590
Vitis vinifera
VIT_12s0028g02590
N
0.841
VIT_19s0014g01780
Vitis vinifera
VIT_19s0014g01780
N
0.786
Ca_12857
Cicer arietinum
Ca_12857
N
0.786
Cla015875
Citrullus lanatus
Cla015875
N
0.841
Cla023708
Citrullus lanatus
Cla023708
N
0.786
Pm011353
Prunus mume
Pm011353
N
0.785
Pm014253
Prunus mume
Pm014253
N
0.841
cassava15850.m1
Manihot esculenta
cassava15850.m1
N
0.841
cassava21652.m1
Manihot esculenta
cassava21652.m1
N
0.786
cassava29375.valid.m1
Manihot esculenta
cassava29375.valid.m1
N
0.790
Cucsa.122790
Cucumis sativus
Cucsa.122790
N
0.856
Cucsa.148840
Cucumis sativus
Cucsa.148840
N
0.841
Cucsa.309420
Cucumis sativus
Cucsa.309420
N
0.787
estExt_fgenesh1_pg.C_160081
Physcomitrella patens
estExt_fgenesh1_pg.C_160081
N
0.831
estExt_fgenesh1_pg.C_220219
Physcomitrella patens
estExt_fgenesh1_pg.C_220219
N
0.798
mgf003967m
Mimulus guttatus
mgf003967m
N
0.856
Aquca_005_00119
Aquilegia coerulea
Aquca_005_00119
N
0.856
Aquca_051_00100
Aquilegia coerulea
Aquca_051_00100
N
0.841
Bostr.20903s0063
Boechera stricta
Bostr.20903s0063
N
0.799
Cagra.0686s0029
Capsella grandiflora
Cagra.0686s0029
N
0.799
Carubv10017617m.g
Capsella rubella
Carubv10017617m.g
N
0.799
Ciclev10008720m.g
Citrus clementina
Ciclev10008720m.g
N
0.814
evm.TU.supercontig_131.79
Carica papaya
evm.TU.supercontig_131.79
N
0.786
evm.TU.supercontig_209.8
Carica papaya
evm.TU.supercontig_209.8
N
0.841
gene27194-v1.0-hybrid
Fragaria vesca
gene27194-v1.0-hybrid
N
0.856
Gorai.002G064900
Gossypium raimondii
Gorai.002G064900
N
0.856
Lus10002185.g
Linum usitatissimum
Lus10002185.g
N
0.799
Lus10017656.g
Linum usitatissimum
Lus10017656.g
N
0.841
Lus10033630.g
Linum usitatissimum
Lus10033630.g
N
0.841
MDP0000133698
Malus domestica
MDP0000133698
N
0.814
MDP0000555457
Malus domestica
MDP0000555457
N
0.836
orange1.1g037696m.g
Citrus sinensis
orange1.1g037696m.g
N
0.814
Pavir.Aa02794
Panicum virgatum
Pavir.Aa02794
N
0.786
Pavir.Ab01112
Panicum virgatum
Pavir.Ab01112
N
0.786
Pavir.Eb03400
Panicum virgatum
Pavir.Eb03400
N
0.786
Pavir.J05339
Panicum virgatum
Pavir.J05339
N
0.807
Pavir.J11397
Panicum virgatum
Pavir.J11397
N
0.807
SapurV1A.0083s0430
Salix purpurea
SapurV1A.0083s0430
N
0.814
SapurV1A.0474s0270
Salix purpurea
SapurV1A.0474s0270
N
0.841
SapurV1A.1977s0020
Salix purpurea
SapurV1A.1977s0020
N
0.799
Thhalv10006090m.g
Eutrema salsugineum
Thhalv10006090m.g
N
0.799
Thhalv10016923m.g
Eutrema salsugineum
Thhalv10016923m.g
N
0.841
PK16223.1
Cannabis sativa
PK16223.1
N
0.856
chr3.CM0160.1080.nc
Lotus japonicus
chr3.CM0160.1080.nc
N
0.799