CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cagra.0686s0029
(
Capsella grandiflora
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Cagra.0686s0029
T071472_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0686s0029.1.p
bZIP
202
261
HDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSVLSPRVAFLDHQRLLLNV
Links
Other
bZIP
family TFs
Other
Capsella grandiflora
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BZIP34
Arabidopsis thaliana
AT2G42380
N
0.814
BZIP61
Arabidopsis thaliana
AT3G58120
N
0.814
Bo6g074510
Brassica oleracea
Bo6g074510
N
0.814
Bo8g092430
Brassica oleracea
Bo8g092430
N
0.814
Bra000256
Brassica rapa
Bra000256
N
0.814
Bra003320
Brassica rapa
Bra003320
N
0.814
Bra007380
Brassica rapa
Bra007380
N
0.814
ATBZIP34
Arabidopsis lyrata
fgenesh2_kg.4__2390__AT2G42380.2
N
0.814
ATBZIP61
Arabidopsis lyrata
fgenesh2_kg.5__2254__AT3G58120.1
N
0.814
GLYMA06G43760
Glycine max
GLYMA06G43760
N
0.814
GLYMA12G33600
Glycine max
GLYMA12G33600
N
0.814
GLYMA13G36870
Glycine max
GLYMA13G36870
N
0.814
MTR_4g079500
Medicago truncatula
MTR_4g079500
N
0.814
POPTR_0013s12810
Populus trichocarpa
POPTR_0013s12810
N
0.814
PRUPE_ppa016271mg
Prunus persica
PRUPE_ppa016271mg
N
0.814
Solyc07g053450.2
Solanum lycopersicum
Solyc07g053450.2
N
0.814
TCM_003607
Theobroma cacao
TCM_003607
N
0.814
VIT_12s0028g02590
Vitis vinifera
VIT_12s0028g02590
N
0.814
Cla015875
Citrullus lanatus
Cla015875
N
0.814
Pm014253
Prunus mume
Pm014253
N
0.814
cassava15850.m1
Manihot esculenta
cassava15850.m1
N
0.814
Cucsa.148840
Cucumis sativus
Cucsa.148840
N
0.814
Bostr.20903s0063
Boechera stricta
Bostr.20903s0063
N
0.814
Carubv10017617m.g
Capsella rubella
Carubv10017617m.g
N
0.814
evm.TU.supercontig_209.8
Carica papaya
evm.TU.supercontig_209.8
N
0.814
Lus10002185.g
Linum usitatissimum
Lus10002185.g
N
0.814
Lus10017656.g
Linum usitatissimum
Lus10017656.g
N
0.814
Lus10033630.g
Linum usitatissimum
Lus10033630.g
N
0.814
SapurV1A.0474s0270
Salix purpurea
SapurV1A.0474s0270
N
0.814
SapurV1A.1977s0020
Salix purpurea
SapurV1A.1977s0020
N
0.814
Thhalv10006090m.g
Eutrema salsugineum
Thhalv10006090m.g
N
0.814
Thhalv10016923m.g
Eutrema salsugineum
Thhalv10016923m.g
N
0.814
chr3.CM0160.1080.nc
Lotus japonicus
chr3.CM0160.1080.nc
N
0.814
Solyc12g010800.1
Solanum lycopersicum
Solyc12g010800.1
N
0.811
MDP0000555457
Malus domestica
MDP0000555457
N
0.810
GLYMA13G34770
Glycine max
GLYMA13G34770
N
0.799
PRUPE_ppa022385mg
Prunus persica
PRUPE_ppa022385mg
N
0.799
Solyc07g062710.2
Solanum lycopersicum
Solyc07g062710.2
N
0.799
TCM_031686
Theobroma cacao
TCM_031686
N
0.799
Cucsa.122790
Cucumis sativus
Cucsa.122790
N
0.799
mgf003967m
Mimulus guttatus
mgf003967m
N
0.799
Aquca_005_00119
Aquilegia coerulea
Aquca_005_00119
N
0.799
Aquca_051_00100
Aquilegia coerulea
Aquca_051_00100
N
0.799
Ciclev10008720m.g
Citrus clementina
Ciclev10008720m.g
N
0.799
gene27194-v1.0-hybrid
Fragaria vesca
gene27194-v1.0-hybrid
N
0.799
Gorai.002G064900
Gossypium raimondii
Gorai.002G064900
N
0.799
Gorai.013G172500
Gossypium raimondii
Gorai.013G172500
N
0.799
MDP0000133698
Malus domestica
MDP0000133698
N
0.799
orange1.1g037696m.g
Citrus sinensis
orange1.1g037696m.g
N
0.799
SapurV1A.0083s0430
Salix purpurea
SapurV1A.0083s0430
N
0.799
PK16223.1
Cannabis sativa
PK16223.1
N
0.799
Cucsa.309420
Cucumis sativus
Cucsa.309420
N
0.795
estExt_fgenesh1_pg.C_160081
Physcomitrella patens
estExt_fgenesh1_pg.C_160081
N
0.790
Bo4g015960
Brassica oleracea
Bo4g015960
N
0.786
Bra004689
Brassica rapa
Bra004689
N
0.786
GLYMA12G14130
Glycine max
GLYMA12G14130
N
0.786
MTR_2g090900
Medicago truncatula
MTR_2g090900
N
0.786
PGSC0003DMG400009388
Solanum tuberosum
PGSC0003DMG400009388
N
0.786
Ca_02472
Cicer arietinum
Ca_02472
N
0.786
Ca_11292
Cicer arietinum
Ca_11292
N
0.786
29646.m001108
Ricinus communis
29646.m001108
N
0.786
Bostr.18722s0001
Boechera stricta
Bostr.18722s0001
N
0.786
Cagra.2636s0024
Capsella grandiflora
Cagra.2636s0024
N
0.786
Carubv10023644m.g
Capsella rubella
Carubv10023644m.g
N
0.786
Ciclev10015966m.g
Citrus clementina
Ciclev10015966m.g
N
0.786
Eucgr.K01085
Eucalyptus grandis
Eucgr.K01085
N
0.786
gene17796-v1.0-hybrid
Fragaria vesca
gene17796-v1.0-hybrid
N
0.786
SapurV1A.0500s0200
Salix purpurea
SapurV1A.0500s0200
N
0.786
SapurV1A.1835s0070
Salix purpurea
SapurV1A.1835s0070
N
0.786
PK21227.1
Cannabis sativa
PK21227.1
N
0.786
PGSC0003DMG401007810
Solanum tuberosum
PGSC0003DMG401007810
N
0.782