CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g015739m.g
(
Citrus sinensis
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
orange1.1g015739m.g
T072250_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK05128.1
M01154_2.00
Cannabis sativa
NNNDBGTRKN
NMYACVHNNN
PBM
Lambert et al.(2019)
pTH10099
0.807
0.635
OS02G0266800
M10046_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RITA1_01
0.806
0.698
CPRF2_PETCR
M10069_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF2_01
0.785
0.587
CPRF2_PETCR
M10070_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF2_Q2
0.785
0.587
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g015739m
bZIP
215
277
IDLKRIRRMVSNRESARRSRKRKQAHMQELELQVERLKGENATLYKQFTDAAQQYKEANTNNR
Links
Other
bZIP
family TFs
Other
Citrus sinensis
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_kg.C_scaffold_1000461
Phytophthora capsici
fgenesh1_kg.C_scaffold_1000461
I
0.000
HpaG811874
Hyaloperonospora arabidopsidis
HpaG811874
N
0.000
PYU1_G004133
Pythium ultimum
PYU1_G004133
N
0.000