fgenesh1_kg.C_scaffold_1000461 (Phytophthora capsici)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 fgenesh1_kg.C_scaffold_1000461 T290838_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra72796
M02331_2.00 		Phytophthora ramorum
NHAYCYNNN
NNNRGRTDN		 PBM
Weirauch et al.(2014)
pTH7803 		0.694 1.000
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_kg.C_scaffold_1000461 Myb 1 32

Links

Other Myb/SANT family TFs
Other Phytophthora capsici TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-pir_contig_1506-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_1506-fgenesh-gene-0.0 N 0.742
Physo142552 Phytophthora sojae Physo142552 I 0.694
PITG_00513 Phytophthora infestans PITG_00513 I 0.694
PYU1_G004134 Pythium ultimum PYU1_G004134 I 0.694
Phyra72796 Phytophthora ramorum Phyra72796 D 0.694
maker-pve_contig_182-snap-gene-0.15 Pythium vexans maker-pve_contig_182-snap-gene-0.15 I 0.694
maker-pir_contig_1401-snap-gene-0.1 Pythium irregulare maker-pir_contig_1401-snap-gene-0.1 I 0.694
F443_04247 Phytophthora parasitica F443_04247 I 0.694
fgenesh_scip_prom.46568.5993 Phytophthora kernoviae fgenesh_scip_prom.46568.5993 I 0.694
maker-par_contig_5774-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_5774-fgenesh-gene-0.0 I 0.684