Pavir.Hb01807 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Hb01807 T072414_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA10
M06783_2.00 		Arabidopsis thaliana
NVTGACGTCAKCDNH
DNHGMTGACGTCABN		 Dap-seq
OMalley et al.(2016)
TGA10_col_a 		0.794 0.848
TGA10
M06784_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA10_colamp_a 		0.794 0.848
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Hb01807.1.p bZIP 171 219
Pavir.Hb01807.2.p bZIP 170 218
Pavir.Hb01807.3.p bZIP 170 218
Pavir.Hb01807.4.p bZIP 171 219

Links

Other bZIP family TFs
Other Panicum virgatum TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR12G16320 Leersia perrieri LPERR12G16320 N
ONIVA02G30390 Oryza nivara ONIVA02G30390 N
ONIVA05G13010 Oryza nivara ONIVA05G13010 N
ONIVA08G21440 Oryza nivara ONIVA08G21440 N
ORGLA02G0147100 Oryza glaberrima ORGLA02G0147100 N
ORUFI09G07100 Oryza rufipogon ORUFI09G07100 N
OS05G0345900 Oryza sativa OS05G0345900 N