CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10004635m.g
(
Eutrema salsugineum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Thhalv10004635m.g
T072634_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BZIP60
M00855_2.00
Arabidopsis thaliana
TGACGTSR
YSACGTCA
PBM
Franco-Zorrilla et al.(2014)
bZIP60
0.848
0.875
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10004635m
bZIP
155
218
DAMAKKRRRRVRNRDAAVRSRERKKEYVTDLEKKSKYLERECMRLGRMLECFVAENHSLRLCLQ
Links
Other
bZIP
family TFs
Other
Eutrema salsugineum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC198366.3_FG004
Zea mays
AC198366.3_FG004
N
BGIOSGA034523
Oryza indica
BGIOSGA034523
N
BRADI4G43200
Brachypodium distachyon
BRADI4G43200
N
MLOC_7637
Hordeum vulgare
MLOC_7637
N
OBART11G02570
Oryza barthii
OBART11G02570
N
OGLUM11G02250
Oryza glumaepatula
OGLUM11G02250
N
OPUNC12G02310
Oryza punctata
OPUNC12G02310
N
OS11G0141500
Oryza sativa
OS11G0141500
N
OS12G0138100
Oryza sativa
OS12G0138100
N
Pavir.Hb01986
Panicum virgatum
Pavir.Hb01986
N