CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10024895m.g
(
Eutrema salsugineum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Thhalv10024895m.g
T072691_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK20942.1
M01159_2.00
Cannabis sativa
NNNNDAMAKCTRN
NYAGMTKTHNNNN
PBM
Lambert et al.(2019)
pTH11276
0.812
0.825
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10024895m
bZIP
384
446
SDPKRVKRILANRQSAARSKERKMRYIVELEHKVQTLQTEATTLSAQLTLLQRDMMGLTNQNN
Links
Other
bZIP
family TFs
Other
Eutrema salsugineum
TFs
154 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK20942.1
Cannabis sativa
PK20942.1
D
0.812
Al_scaffold_0007_76
Arabidopsis lyrata
Al_scaffold_0007_76
I
0.860
AT4G38900
Arabidopsis thaliana
AT4G38900
I
0.877
BGIOSGA029105
Oryza indica
BGIOSGA029105
I
0.852
BGIOSGA029106
Oryza indica
BGIOSGA029106
I
0.852
Bo3g149620
Brassica oleracea
Bo3g149620
I
0.861
Bo5g007170
Brassica oleracea
Bo5g007170
I
0.808
Bo7g119550
Brassica oleracea
Bo7g119550
I
0.877
Bo8g005940
Brassica oleracea
Bo8g005940
I
0.793
Bra010722
Brassica rapa
Bra010722
I
0.877
Bra015471
Brassica rapa
Bra015471
I
0.808
Bra030637
Brassica rapa
Bra030637
I
0.808
Bra033582
Brassica rapa
Bra033582
I
0.877
BRADI3G41980
Brachypodium distachyon
BRADI3G41980
I
0.852
BRADI5G14497
Brachypodium distachyon
BRADI5G14497
I
0.860
F775_32059
Aegilops tauschii
F775_32059
I
0.852
GLYMA04G02850
Glycine max
GLYMA04G02850
I
0.837
GLYMA11G11791
Glycine max
GLYMA11G11791
I
0.875
GLYMA11G13510
Glycine max
GLYMA11G13510
I
0.812
GLYMA12G04050
Glycine max
GLYMA12G04050
I
0.875
GLYMA12G05520
Glycine max
GLYMA12G05520
I
0.812
GLYMA13G42030
Glycine max
GLYMA13G42030
I
0.788
GLYMA15G03350
Glycine max
GLYMA15G03350
I
0.788
GRMZM2G332294
Zea mays
GRMZM2G332294
I
0.802
GSMUA_Achr11G14990_001
Musa acuminata
GSMUA_Achr11G14990_001
I
0.866
GSMUA_Achr3G12290_001
Musa acuminata
GSMUA_Achr3G12290_001
I
0.875
GSMUA_Achr5G25700_001
Musa acuminata
GSMUA_Achr5G25700_001
I
0.866
GSMUA_Achr8G12090_001
Musa acuminata
GSMUA_Achr8G12090_001
I
0.835
GSMUA_AchrUn_randomG00680_001
Musa acuminata
GSMUA_AchrUn_randomG00680_001
I
0.866
MLOC_64362
Hordeum vulgare
MLOC_64362
I
0.852
MLOC_64781
Hordeum vulgare
MLOC_64781
I
0.825
MLOC_75510
Hordeum vulgare
MLOC_75510
I
0.852
MTR_4g072090
Medicago truncatula
MTR_4g072090
I
0.875
OB09G23080
Oryza brachyantha
OB09G23080
I
0.825
OGLUM09G17020
Oryza glumaepatula
OGLUM09G17020
I
0.825
OMERI09G12160
Oryza meridionalis
OMERI09G12160
I
0.825
RF2A
Oryza sativa
OS09G0516200
I
0.825
PGSC0003DMG400001659
Solanum tuberosum
PGSC0003DMG400001659
I
0.875
POPTR_0004s17080
Populus trichocarpa
POPTR_0004s17080
I
0.875
POPTR_0009s12830
Populus trichocarpa
POPTR_0009s12830
I
0.875
POPTR_0017s05610
Populus trichocarpa
POPTR_0017s05610
I
0.812
Sb06g021350
Sorghum bicolor
Sb06g021350
I
0.864
Sb07g025490
Sorghum bicolor
Sb07g025490
I
0.809
scaffold_100594.1
Arabidopsis lyrata
scaffold_100594.1
I
0.793
SELMODRAFT_129846
Selaginella moellendorffii
SELMODRAFT_129846
I
0.866
SELMODRAFT_34663
Selaginella moellendorffii
SELMODRAFT_34663
I
0.866
SELMODRAFT_77868
Selaginella moellendorffii
SELMODRAFT_77868
I
0.866
Si015587m.g
Setaria italica
Si015587m.g
I
0.809
Solyc01g110480.2
Solanum lycopersicum
Solyc01g110480.2
I
0.875
Solyc06g053350.2
Solanum lycopersicum
Solyc06g053350.2
I
0.803
TCM_006766
Theobroma cacao
TCM_006766
I
0.875
TCM_019998
Theobroma cacao
TCM_019998
I
0.812
Traes_2AL_FA1957F59
Triticum aestivum
Traes_2AL_FA1957F59
I
0.852
Traes_7BS_7B68879A9
Triticum aestivum
Traes_7BS_7B68879A9
I
0.852
Traes_7DS_3463CAE33
Triticum aestivum
Traes_7DS_3463CAE33
I
0.852
TRIUR3_31242
Triticum urartu
TRIUR3_31242
I
0.852
VIT_03s0038g00860
Vitis vinifera
VIT_03s0038g00860
I
0.875
VIT_05s0102g01120
Vitis vinifera
VIT_05s0102g01120
I
0.812
Ca_02692
Cicer arietinum
Ca_02692
I
0.788
Ca_27693
Cicer arietinum
Ca_27693
I
0.875
Cla016124
Citrullus lanatus
Cla016124
I
0.875
Cla016125
Citrullus lanatus
Cla016125
I
0.875
cassava30160.valid.m1
Manihot esculenta
cassava30160.valid.m1
I
0.875
cassava32399.m1
Manihot esculenta
cassava32399.m1
I
0.812
cassava38273.valid.m1
Manihot esculenta
cassava38273.valid.m1
I
0.875
cassava43164.valid.m1
Manihot esculenta
cassava43164.valid.m1
I
0.812
Cucsa.062530
Cucumis sativus
Cucsa.062530
I
0.812
Cucsa.251880
Cucumis sativus
Cucsa.251880
I
0.793
Cucsa.382180
Cucumis sativus
Cucsa.382180
I
0.875
Cucsa.382190
Cucumis sativus
Cucsa.382190
I
0.875
e_gw1.20.99.1
Physcomitrella patens
e_gw1.20.99.1
I
0.839
estExt_gwp_gw1.C_200078
Physcomitrella patens
estExt_gwp_gw1.C_200078
I
0.839
estExt_gwp_gw1.C_5120003
Physcomitrella patens
estExt_gwp_gw1.C_5120003
I
0.865
gw1.20.225.1
Physcomitrella patens
gw1.20.225.1
I
0.865
mgf000302m
Mimulus guttatus
mgf000302m
I
0.875
mgf004912m
Mimulus guttatus
mgf004912m
I
0.875
Aquca_006_00159
Aquilegia coerulea
Aquca_006_00159
I
0.852
Bostr.25219s0353
Boechera stricta
Bostr.25219s0353
I
0.793
Bostr.25542s0069
Boechera stricta
Bostr.25542s0069
I
0.877
Cagra.1671s0236
Capsella grandiflora
Cagra.1671s0236
I
0.793
Carubv10008993m.g
Capsella rubella
Carubv10008993m.g
I
0.793
Ciclev10028062m.g
Citrus clementina
Ciclev10028062m.g
I
0.875
Eucgr.D00737
Eucalyptus grandis
Eucgr.D00737
I
0.827
Eucgr.I01335
Eucalyptus grandis
Eucgr.I01335
I
0.875
evm.TU.supercontig_150.7
Carica papaya
evm.TU.supercontig_150.7
I
0.875
evm.TU.supercontig_81.160
Carica papaya
evm.TU.supercontig_81.160
I
0.834
gene01680-v1.0-hybrid
Fragaria vesca
gene01680-v1.0-hybrid
I
0.857
gene23487-v1.0-hybrid
Fragaria vesca
gene23487-v1.0-hybrid
I
0.812
Gorai.001G243800
Gossypium raimondii
Gorai.001G243800
I
0.875
Gorai.005G015900
Gossypium raimondii
Gorai.005G015900
I
0.810
Gorai.005G248900
Gossypium raimondii
Gorai.005G248900
I
0.875
Gorai.006G229500
Gossypium raimondii
Gorai.006G229500
I
0.793
Gorai.011G140400
Gossypium raimondii
Gorai.011G140400
I
0.797
Lus10018061.g
Linum usitatissimum
Lus10018061.g
I
0.875
Lus10019376.g
Linum usitatissimum
Lus10019376.g
I
0.804
Lus10042057.g
Linum usitatissimum
Lus10042057.g
I
0.875
orange1.1g007579m.g
Citrus sinensis
orange1.1g007579m.g
I
0.875
SapurV1A.0091s0130
Salix purpurea
SapurV1A.0091s0130
I
0.875
SapurV1A.0379s0290
Salix purpurea
SapurV1A.0379s0290
I
0.875
Thhalv10007692m.g
Eutrema salsugineum
Thhalv10007692m.g
I
0.793
PK00843.1
Cannabis sativa
PK00843.1
I
0.875
chr3.CM0106.340.nd
Lotus japonicus
chr3.CM0106.340.nd
I
0.788
PDK_20s1312701g003
Phoenix dactylifera
PDK_20s1312701g003
I
0.862
BGIOSGA011761
Oryza indica
BGIOSGA011761
N
0.818
BRADI1G76690
Brachypodium distachyon
BRADI1G76690
N
0.837
BRADI3G31890
Brachypodium distachyon
BRADI3G31890
N
0.800
F775_33214
Aegilops tauschii
F775_33214
N
0.796
GRMZM2G353553
Zea mays
GRMZM2G353553
N
0.800
GRMZM2G428184
Zea mays
GRMZM2G428184
N
0.837
GRMZM2G473274
Zea mays
GRMZM2G473274
N
0.818
GSMUA_Achr1G08090_001
Musa acuminata
GSMUA_Achr1G08090_001
N
0.811
GSMUA_Achr5G20200_001
Musa acuminata
GSMUA_Achr5G20200_001
N
0.793
LPERR03G02000
Leersia perrieri
LPERR03G02000
N
0.805
LPERR04G13880
Leersia perrieri
LPERR04G13880
N
0.809
LPERR10G12670
Leersia perrieri
LPERR10G12670
N
0.800
MLOC_10725
Hordeum vulgare
MLOC_10725
N
0.835
MLOC_66865
Hordeum vulgare
MLOC_66865
N
0.785
MTR_1g023690
Medicago truncatula
MTR_1g023690
N
0.820
OB03G12130
Oryza brachyantha
OB03G12130
N
0.814
OB10G23730
Oryza brachyantha
OB10G23730
N
0.800
OBART03G02190
Oryza barthii
OBART03G02190
N
0.818
OGLUM03G02140
Oryza glumaepatula
OGLUM03G02140
N
0.818
OLONG_011520
Oryza longistaminata
OLONG_011520
N
0.818
OLONG_016151
Oryza longistaminata
OLONG_016151
N
0.800
OMERI03G02030
Oryza meridionalis
OMERI03G02030
N
0.818
ONIVA03G01800
Oryza nivara
ONIVA03G01800
N
0.818
OPUNC03G01930
Oryza punctata
OPUNC03G01930
N
0.818
OPUNC10G15060
Oryza punctata
OPUNC10G15060
N
0.800
ORGLA03G0019600
Oryza glaberrima
ORGLA03G0019600
N
0.818
ORUFI03G01930
Oryza rufipogon
ORUFI03G01930
N
0.818
OS03G0127500
Oryza sativa
OS03G0127500
N
0.818
OS10G0531900
Oryza sativa
OS10G0531900
N
0.800
Sb01g030770
Sorghum bicolor
Sb01g030770
N
0.800
Sb01g048710
Sorghum bicolor
Sb01g048710
N
0.837
Si035841m.g
Setaria italica
Si035841m.g
N
0.837
Si039566m.g
Setaria italica
Si039566m.g
N
0.800
TCM_034172
Theobroma cacao
TCM_034172
N
0.809
Traes_1AL_2AC682D6D
Triticum aestivum
Traes_1AL_2AC682D6D
N
0.785
TRIUR3_15472
Triticum urartu
TRIUR3_15472
N
0.785
TRIUR3_20880
Triticum urartu
TRIUR3_20880
N
0.796
TRIUR3_23538
Triticum urartu
TRIUR3_23538
N
0.803
Ca_10755
Cicer arietinum
Ca_10755
N
0.804
30131.m007145
Ricinus communis
30131.m007145
N
0.810
fgenesh1_pg.scaffold_3000202
Physcomitrella patens
fgenesh1_pg.scaffold_3000202
N
0.788
Aquca_007_00377
Aquilegia coerulea
Aquca_007_00377
N
0.790
Cagra.1383s0070
Capsella grandiflora
Cagra.1383s0070
N
0.833
Carubv10004500m.g
Capsella rubella
Carubv10004500m.g
N
0.833
Lus10012391.g
Linum usitatissimum
Lus10012391.g
N
0.783
orange1.1g014471m.g
Citrus sinensis
orange1.1g014471m.g
N
0.801
Pavir.Ia02926
Panicum virgatum
Pavir.Ia02926
N
0.800
Pavir.Ib00162
Panicum virgatum
Pavir.Ib00162
N
0.793
Pavir.J19159
Panicum virgatum
Pavir.J19159
N
0.835
Pavir.J22781
Panicum virgatum
Pavir.J22781
N
0.800
Pavir.J29906
Panicum virgatum
Pavir.J29906
N
0.837