xbp1.L (Xenopus laevis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 XB-GENE-487128 T073057_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
XBP1
M02825_2.00 		Homo sapiens
GVTGACGTCABB
VVTGACGTCABC		 SELEX
Jolma et al.(2013)
XBP1_1 		0.857 0.859
XBP1
M02826_2.00 		Homo sapiens
GVTGACGTGKCVHW
WDBGMCACGTCABC		 SELEX
Jolma et al.(2013)
XBP1_2 		0.857 0.859
XBP1
M02730_2.00 		Homo sapiens
GACGTGKCNNW
WNNGMCACGTC		 SELEX
Jolma et al.(2010)
XBP1_monomer 		0.857 0.859
XBP1
M04231_2.00 		Homo sapiens
NVTGACGTGKNN
NNMCACGTCABN		 SELEX
Yin et al.(2017)
XBP1_FL_HT-SELEX_1 		0.857 0.859
XBP1
M04232_2.00 		Homo sapiens
NVTKACGTMABV
BVTKACGTMABN		 SELEX
Yin et al.(2017)
XBP1_FL_HT-SELEX_2 		0.857 0.859
XBP1
M04010_2.00 		Homo sapiens
GRTGACGTGKCV
BGMCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
XBP1.1 		0.857 0.859
XBP1
M04011_2.00 		Homo sapiens
GRTGACGTCAYS
SRTGACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
XBP1.2 		0.857 0.859
XBP1
M04012_2.00 		Homo sapiens
KGMCACGTGKMCH
DGKMCACGTGKCM		 SELEX
Rodriguez-Martinez et al.(2017)
XBP1.3 		0.857 0.859
XBP1
M09932_2.00 		Homo sapiens
NHNWDHRVTGACGTGKHNHWDDHB
VDHHWDNDMCACGTCABYDHWNDN		 Transfac
Matys et al.(2006)
V$HTF_01 		0.857 0.859
XBP1
M09933_2.00 		Homo sapiens
DBRHTKACGTGKHNHWD
HWDNDMCACGTMADYVH		 Transfac
Matys et al.(2006)
V$XBP1_01 		0.857 0.859
XBP1
M04233_2.00 		Homo sapiens
BKMCACRTCAYS
SRTGAYGTGKMV		 SELEX
Yin et al.(2017)
XBP1_FL_Methyl-HT-SELEX_1 		0.857 0.859
XBP1
M04234_2.00 		Homo sapiens
VVTGWCRTCAYS
SRTGAYGWCABB		 SELEX
Yin et al.(2017)
XBP1_FL_Methyl-HT-SELEX_2 		0.857 0.859
Xbp1
M00757_2.00 		Mus musculus
NNHBAYDNNN
NNNHRTVDNN		 PBM
Weirauch et al.(2013)
pTH2852 		0.857 0.844
Xbp1
M01802_2.00 		Mus musculus
NHNACGYNN
NNRCGTNDN		 PBM
Weirauch et al.(2014)
pTH5019 		0.857 0.844
Xbp1
M08818_2.00 		Mus musculus
GACGTGKCMHWD
HWDKGMCACGTC		 Misc
Kulakovskiy et al.(2013)
XBP1_MOUSE.H11MO.0.C 		0.857 0.844
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH43852 bZIP 55 118
AAI10724 bZIP 55 118
AAK48906 bZIP 55 118

Links

Other bZIP family TFs
Other Xenopus laevis TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CY34DRAFT_80380 Suillus luteus CY34DRAFT_80380 I
FOMPIDRAFT_1131533 Fomitopsis pinicola FOMPIDRAFT_1131533 I
M404DRAFT_167400 Pisolithus tinctorius M404DRAFT_167400 I
AGABI2DRAFT_66190 Agaricus bisporus AGABI2DRAFT_66190 N
BN946_scf184945.g29 Trametes cinnabarina BN946_scf184945.g29 N
FIBRA_06404 Fibroporia radiculosa FIBRA_06404 N
GLOTRDRAFT_44424 Gloeophyllum trabeum GLOTRDRAFT_44424 N
HETIRDRAFT_244448 Heterobasidion irregulare HETIRDRAFT_244448 N
HYDPIDRAFT_93371 Hydnomerulius pinastri HYDPIDRAFT_93371 N
JAAARDRAFT_89178 Jaapia argillacea JAAARDRAFT_89178 N
K443DRAFT_40605 Laccaria amethystina K443DRAFT_40605 N
PAXINDRAFT_79316 Paxillus involutus PAXINDRAFT_79316 N
PILCRDRAFT_87339 Piloderma croceum PILCRDRAFT_87339 N
PISMIDRAFT_96499 Pisolithus microcarpus PISMIDRAFT_96499 N
PLEOSDRAFT_170260 Pleurotus ostreatus PLEOSDRAFT_170260 N
SCLCIDRAFT_139949 Scleroderma citrinum SCLCIDRAFT_139949 N