atf3.L (Xenopus laevis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 XB-GENE-6085256 T073071_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Atf3
M00758_2.00 		Mus musculus
NNRTKAYNN
NNRTMAYNN		 PBM
Weirauch et al.(2013)
pTH2684 		0.903 0.871
Atf3
M01807_2.00 		Mus musculus
GATGACGY
RCGTCATC		 PBM
Weirauch et al.(2014)
pTH5018 		0.903 0.871
Atf3
M08825_2.00 		Mus musculus
VTGACTCAB
VTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
ATF3_MOUSE.H11MO.0.A 		0.903 0.871
JDP2
M02836_2.00 		Homo sapiens
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
JDP2_1 		0.881 0.726
JDP2
M02837_2.00 		Homo sapiens
NRTGACGTCATB
VATGACGTCAYN		 SELEX
Jolma et al.(2013)
JDP2_2 		0.881 0.726
JDP2
M02838_2.00 		Homo sapiens
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
JDP2_3 		0.881 0.726
JDP2
M02839_2.00 		Homo sapiens
NRTGACGTCATN
NATGACGTCAYN		 SELEX
Jolma et al.(2013)
JDP2_4 		0.881 0.726
JDP2
M04285_2.00 		Homo sapiens
NATGASTCATV
BATGASTCATN		 SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_1 		0.881 0.726
JDP2
M04286_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_2 		0.881 0.726
JDP2
M04289_2.00 		Homo sapiens
NRTGMSKCAYN
NRTGMSKCAYN		 SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_1 		0.881 0.726
JDP2
M04290_2.00 		Homo sapiens
NRTKACRTMAYN
NRTKAYGTMAYN		 SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_2 		0.881 0.726
JDP2
M04287_2.00 		Homo sapiens
BATGASTCAYN
NRTGASTCATV		 SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_1 		0.881 0.726
JDP2
M04288_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_2 		0.881 0.726
JDP2
M04291_2.00 		Homo sapiens
NRTGASTCAYN
NRTGASTCAYN		 SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_1 		0.881 0.726
JDP2
M04292_2.00 		Homo sapiens
NVTKACRTCAYN
NRTGAYGTMABN		 SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_2 		0.881 0.726
Jdp2
M00125_2.00 		Mus musculus
NRTGAYDNNN
NNNHRTCAYN		 PBM
Badis et al.(2009)
Jundm2_0911 		0.879 0.726
Jdp2
M01810_2.00 		Mus musculus
NNTGACGYMW
WKRCGTCANN		 PBM
Weirauch et al.(2014)
pTH5464 		0.879 0.726
Jdp2
M02861_2.00 		Mus musculus
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
Jdp2_1 		0.879 0.726
Jdp2
M02862_2.00 		Mus musculus
VATGACGTCAYN
NRTGACGTCATB		 SELEX
Jolma et al.(2013)
Jdp2_2 		0.879 0.726
Jdp2
M10033_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$JDP2_03 		0.879 0.726
ATF3
M04321_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF3_eDBD_HT-SELEX 		0.811 0.452
ATF3
M04323_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF3_FL_HT-SELEX 		0.811 0.452
ATF3
M04032_2.00 		Homo sapiens
RTGACGTCAK
MTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF3.1 		0.811 0.452
ATF3
M04033_2.00 		Homo sapiens
RTGACTCAY
RTGAGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF3.2 		0.811 0.452
ATF3
M07822_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
GM12878_ATF3_HudsonAlpha 		0.811 0.452
ATF3
M07823_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_ATF3_HudsonAlpha 		0.811 0.452
ATF3
M07824_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
HepG2_ATF3_HudsonAlpha 		0.811 0.452
ATF3
M07825_2.00 		Homo sapiens
VRTSACGTVR
YBACGTSAYB		 ChIP-seq
Gerstein et al.(2012)
K562_ATF3_Harvard 		0.811 0.452
ATF3
M08187_2.00 		Homo sapiens
GTCACGTG
CACGTGAC		 ChIP-seq
Contrino et al.(2012)
Mv41 		0.811 0.452
ATF3
M08188_2.00 		Homo sapiens
NRTGASTCAY
RTGASTCAYN		 ChIP-seq
Contrino et al.(2012)
Mv43 		0.811 0.452
ATF3
M08801_2.00 		Homo sapiens
RRTSACGTVRB
VYBACGTSAYY		 Misc
Kulakovskiy et al.(2013)
ATF3_HUMAN.H11MO.0.A 		0.811 0.452
ATF3
M09489_2.00 		Homo sapiens
NVTGASTCABNN
NNVTGASTCABN		 Misc
Heinz et al.(2010)
GBM-ATF3_GSE33912 		0.811 0.452
ATF3
M09977_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_02 		0.811 0.452
ATF3
M09978_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_05 		0.811 0.452
ATF3
M09979_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6_01 		0.811 0.452
ATF3
M09980_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6_02 		0.811 0.452
ATF3
M09981_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6 		0.811 0.452
ATF3
M04322_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
ATF3_eDBD_Methyl-HT-SELEX 		0.811 0.452
ATF3
M04324_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
ATF3_FL_Methyl-HT-SELEX 		0.811 0.452
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH80002 bZIP 84 145

Links

Other bZIP family TFs
Other Xenopus laevis TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
JDP2 Homo sapiens ENSG00000140044 D 0.881
ATF3 Homo sapiens ENSG00000162772 D 0.903
Atf3 Mus musculus ENSMUSG00000026628 D 0.903
Jdp2 Mus musculus ENSMUSG00000034271 D 0.879
Jdp2 Rattus norvegicus ENSRNOG00000008224 D 0.879
ACYPI32234 Acyrthosiphon pisum ACYPI32234 I 0.788
DAPPUDRAFT_222762 Daphnia pulex DAPPUDRAFT_222762 I 0.822
ATF3 Anolis carolinensis ENSACAG00000006353 I 0.906
JDP2 Anolis carolinensis ENSACAG00000016944 I 0.881
ENSAMEG00000001342 Ailuropoda melanoleuca ENSAMEG00000001342 I 0.903
ENSAMEG00000018337 Ailuropoda melanoleuca ENSAMEG00000018337 I 0.881
ENSAMXG00000010494 Astyanax mexicanus ENSAMXG00000010494 I 0.880
ENSAMXG00000013804 Astyanax mexicanus ENSAMXG00000013804 I 0.888
ENSAMXG00000014502 Astyanax mexicanus ENSAMXG00000014502 I 0.881
ENSAPLG00000011380 Anas platyrhynchos ENSAPLG00000011380 I 0.881
ENSAPLG00000012304 Anas platyrhynchos ENSAPLG00000012304 I 0.906
ATF3 Bos taurus ENSBTAG00000008545 I 0.903
JDP2 Bos taurus ENSBTAG00000009451 I 0.881
ATF3 Canis familiaris ENSCAFG00000012339 I 0.903
JDP2 Canis familiaris ENSCAFG00000017042 I 0.881
ATF3 Choloepus hoffmanni ENSCHOG00000010259 I 0.903
ATF3 Callithrix jacchus ENSCJAG00000015735 I 0.866
JDP2 Callithrix jacchus ENSCJAG00000020645 I 0.881
ENSCPOG00000006636 Cavia porcellus ENSCPOG00000006636 I 0.881
ENSCPOG00000019424 Cavia porcellus ENSCPOG00000019424 I 0.903
ENSCSAG00000012122 Chlorocebus sabaeus ENSCSAG00000012122 I 0.881
ENSCSAG00000015405 Chlorocebus sabaeus ENSCSAG00000015405 I 0.903
ENSCSAVG00000000153 Ciona savignyi ENSCSAVG00000000153 I 0.787
atf3 Danio rerio ENSDARG00000007823 I 0.880
jdp2b Danio rerio ENSDARG00000020133 I 0.915
jdp2a Danio rerio ENSDARG00000040137 I 0.881
JDP2 Dasypus novemcinctus ENSDNOG00000033141 I 0.881
ENSDNOG00000044236 Dasypus novemcinctus ENSDNOG00000044236 I 0.902
ENSDORG00000006025 Dipodomys ordii ENSDORG00000006025 I 0.903
ENSDORG00000012888 Dipodomys ordii ENSDORG00000012888 I 0.881
ATF3 Equus caballus ENSECAG00000011486 I 0.903
JDP2 Equus caballus ENSECAG00000014862 I 0.881
ATF3 Erinaceus europaeus ENSEEUG00000010993 I 0.892
ATF3 Echinops telfairi ENSETEG00000015701 I 0.903
ENSFALG00000006358 Ficedula albicollis ENSFALG00000006358 I 0.881
ENSFALG00000012408 Ficedula albicollis ENSFALG00000012408 I 0.906
JDP2 Felis catus ENSFCAG00000029464 I 0.881
ATF3 Felis catus ENSFCAG00000029636 I 0.903
jdp2a Gasterosteus aculeatus ENSGACG00000007611 I 0.905
jdp2b Gasterosteus aculeatus ENSGACG00000010513 I 0.894
atf3 Gasterosteus aculeatus ENSGACG00000011997 I 0.867
JDP2 Gallus gallus ENSGALG00000010322 I 0.881
ATF3 Gallus gallus ENSGALG00000025887 I 0.906
JDP2 Gorilla gorilla ENSGGOG00000010752 I 0.881
ATF3 Gorilla gorilla ENSGGOG00000014206 I 0.903
ENSGMOG00000011063 Gadus morhua ENSGMOG00000011063 I 0.894
ENSGMOG00000015382 Gadus morhua ENSGMOG00000015382 I 0.874
ENSGMOG00000016268 Gadus morhua ENSGMOG00000016268 I 0.889
ENSLACG00000001315 Latimeria chalumnae ENSLACG00000001315 I 0.876
ENSLACG00000018083 Latimeria chalumnae ENSLACG00000018083 I 0.889
JDP2 Loxodonta africana ENSLAFG00000025757 I 0.881
ATF3 Loxodonta africana ENSLAFG00000032487 I 0.903
ENSLOCG00000000814 Lepisosteus oculatus ENSLOCG00000000814 I 0.879
ENSLOCG00000010526 Lepisosteus oculatus ENSLOCG00000010526 I 0.881
ENSMEUG00000007708 Macropus eugenii ENSMEUG00000007708 I 0.903
ENSMEUG00000011212 Macropus eugenii ENSMEUG00000011212 I 0.881
ATF3 Meleagris gallopavo ENSMGAG00000009708 I 0.906
JDP2 Meleagris gallopavo ENSMGAG00000012755 I 0.881
ENSMICG00000016031 Microcebus murinus ENSMICG00000016031 I 0.881
ENSMLUG00000002256 Myotis lucifugus ENSMLUG00000002256 I 0.881
ATF3 Myotis lucifugus ENSMLUG00000015048 I 0.903
ATF3 Macaca mulatta ENSMMUG00000012185 I 0.903
ATF3 Monodelphis domestica ENSMODG00000003042 I 0.903
JDP2 Monodelphis domestica ENSMODG00000005909 I 0.881
ENSMPUG00000009147 Mustela putorius furo ENSMPUG00000009147 I 0.881
ENSMPUG00000015864 Mustela putorius furo ENSMPUG00000015864 I 0.903
ENSNLEG00000002916 Nomascus leucogenys ENSNLEG00000002916 I 0.903
ENSNLEG00000016475 Nomascus leucogenys ENSNLEG00000016475 I 0.881
ATF3 Ornithorhynchus anatinus ENSOANG00000008502 I 0.903
ENSOARG00000001796 Ovis aries ENSOARG00000001796 I 0.881
ENSOARG00000010493 Ovis aries ENSOARG00000010493 I 0.903
JDP2 Oryctolagus cuniculus ENSOCUG00000008466 I 0.881
ATF3 Oryctolagus cuniculus ENSOCUG00000017424 I 0.903
ATF3 Otolemur garnettii ENSOGAG00000005803 I 0.903
JDP2 Otolemur garnettii ENSOGAG00000024796 I 0.881
ENSONIG00000015268 Oreochromis niloticus ENSONIG00000015268 I 0.870
ENSONIG00000018687 Oreochromis niloticus ENSONIG00000018687 I 0.887
ENSONIG00000020186 Oreochromis niloticus ENSONIG00000020186 I 0.897
JDP2 Ochotona princeps ENSOPRG00000012032 I 0.881
ATF3 Ochotona princeps ENSOPRG00000013252 I 0.903
jdp2a Oryzias latipes ENSORLG00000016515 I 0.902
jdp2b Oryzias latipes ENSORLG00000017506 I 0.870
atf3 Oryzias latipes ENSORLG00000019980 I 0.899
ENSPANG00000019986 Papio anubis ENSPANG00000019986 I 0.881
ENSPANG00000021687 Papio anubis ENSPANG00000021687 I 0.903
ATF3 Procavia capensis ENSPCAG00000000178 I 0.892
ENSPFOG00000007886 Poecilia formosa ENSPFOG00000007886 I 0.870
ENSPFOG00000007903 Poecilia formosa ENSPFOG00000007903 I 0.870
ENSPFOG00000015014 Poecilia formosa ENSPFOG00000015014 I 0.897
ENSPFOG00000017099 Poecilia formosa ENSPFOG00000017099 I 0.869
ENSPMAG00000000427 Petromyzon marinus ENSPMAG00000000427 I 0.867
ENSPMAG00000006157 Petromyzon marinus ENSPMAG00000006157 I 0.786
ENSPPYG00000000235 Pongo abelii ENSPPYG00000000235 I 0.903
ENSPPYG00000006004 Pongo abelii ENSPPYG00000006004 I 0.881
ENSPSIG00000017647 Pelodiscus sinensis ENSPSIG00000017647 I 0.854
ENSPSIG00000017967 Pelodiscus sinensis ENSPSIG00000017967 I 0.906
ATF3 Pan troglodytes ENSPTRG00000001962 I 0.903
JDP2 Pan troglodytes ENSPTRG00000006555 I 0.881
JDP2 Pteropus vampyrus ENSPVAG00000000672 I 0.881
Atf3 Rattus norvegicus ENSRNOG00000003745 I 0.903
ENSSHAG00000010413 Sarcophilus harrisii ENSSHAG00000010413 I 0.903
ENSSHAG00000017391 Sarcophilus harrisii ENSSHAG00000017391 I 0.881
ATF3 Sus scrofa ENSSSCG00000015595 I 0.903
ENSSTOG00000007121 Ictidomys tridecemlineatus ENSSTOG00000007121 I 0.903
ENSSTOG00000026831 Ictidomys tridecemlineatus ENSSTOG00000026831 I 0.881
ATF3 Tupaia belangeri ENSTBEG00000002717 I 0.903
ENSTBEG00000014483 Tupaia belangeri ENSTBEG00000014483 I 0.881
ATF3 Taeniopygia guttata ENSTGUG00000003050 I 0.906
JDP2 Taeniopygia guttata ENSTGUG00000012219 I 0.881
atf3 Tetraodon nigroviridis ENSTNIG00000002524 I 0.854
ENSTNIG00000016355 Tetraodon nigroviridis ENSTNIG00000016355 I 0.872
jdp2a Tetraodon nigroviridis ENSTNIG00000017406 I 0.897
jdp2b Takifugu rubripes ENSTRUG00000010344 I 0.872
atf3 Takifugu rubripes ENSTRUG00000015975 I 0.885
jdp2a Takifugu rubripes ENSTRUG00000018323 I 0.888
ENSTSYG00000010193 Tarsius syrichta ENSTSYG00000010193 I 0.903
ATF3 Tursiops truncatus ENSTTRG00000013897 I 0.903
ENSVPAG00000003090 Vicugna pacos ENSVPAG00000003090 I 0.798
ATF3 Vicugna pacos ENSVPAG00000011563 I 0.903
ENSXMAG00000004013 Xiphophorus maculatus ENSXMAG00000004013 I 0.870
ENSXMAG00000004443 Xiphophorus maculatus ENSXMAG00000004443 I 0.869
ENSXMAG00000014805 Xiphophorus maculatus ENSXMAG00000014805 I 0.897
GI21781 Drosophila mojavensis FBgn0144511 I 0.789
GM18988 Drosophila sechellia FBgn0173891 I 0.784
GJ16954 Drosophila virilis FBgn0204132 I 0.789
GB53401 Apis mellifera GB53401 I 0.797
HMEL006570 Heliconius melpomene HMEL006570 I 0.808
ISCW023105 Ixodes scapularis ISCW023105 I 0.806
KGM_03513 Danaus plexippus KGM_03513 I 0.799
L798_12793 Zootermopsis nevadensis L798_12793 I 0.795
MCINX010628 Melitaea cinxia MCINX010628 I 0.808
PHUM288370 Pediculus humanus PHUM288370 I 0.789
RPRC001561 Rhodnius prolixus RPRC001561 I 0.808
SINV20083 Solenopsis invicta SINV20083 I 0.797
Aan_R000237 Calypte anna Aan_R000237 I 0.906
Aan_R005677 Calypte anna Aan_R005677 I 0.881
Aan_R011482 Calypte anna Aan_R011482 I 0.906
Afo_R004508 Aptenodytes forsteri Afo_R004508 I 0.881
Afo_R004731 Aptenodytes forsteri Afo_R004731 I 0.906
Alligator_sinensis_CCG002912.1 Alligator sinensis Alligator_sinensis_CCG002912.1 I 0.906
Brh_R009866 Buceros rhinoceros Brh_R009866 I 0.906
Brh_R010146 Buceros rhinoceros Brh_R010146 I 0.846
Cflo_05052--XP_392513.1_APIME Camponotus floridanus Cflo_05052--XP_392513.1_APIME I 0.797
Cmyd_10020806 Chelonia mydas Cmyd_10020806 I 0.906
ENSBTAP00000011265-D1 Bos grunniens ENSBTAP00000011265-D1 I 0.903
ENSMMUP00000003747 Macaca fascicularis ENSMMUP00000003747 I 0.881
ENSP00000267569-D1 Bos grunniens ENSP00000267569-D1 I 0.881
ENSP00000355954 Macaca fascicularis ENSP00000355954 I 0.903
Gfo_R010939 Geospiza fortis Gfo_R010939 I 0.906
Gfo_R012906 Geospiza fortis Gfo_R012906 I 0.881
Hsal_14793--XP_392513.1_APIME Harpegnathos saltator Hsal_14793--XP_392513.1_APIME I 0.797
Myotis_brandtii_Atf3_10018256 Myotis brandtii Myotis_brandtii_Atf3_10018256 I 0.903
Myotis_brandtii_JDP2_10012947 Myotis brandtii Myotis_brandtii_JDP2_10012947 I 0.881
Ogr08030 Ophisaurus gracilis Ogr08030 I 0.881
Ogr11165 Ophisaurus gracilis Ogr11165 I 0.906
Pvit_01216 Pogona vitticeps Pvit_01216 I 0.881
Pvit_13387 Pogona vitticeps Pvit_13387 I 0.921
Tal_R002996 Tyto alba Tal_R002996 I 0.906
CLEC002857 Cimex lectularius CLEC002857 I 0.801
LCUP009590 Lucilia cuprina LCUP009590 I 0.790
atf3 Xenopus tropicalis XB-GENE-6085251 I 0.926
MDOA009377 Musca domestica MDOA009377 I 0.789