CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDK_20s1367981g001
(
Phoenix dactylifera
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
PDK_20s1367981g001
T073492_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK00315.1
M01153_2.00
Cannabis sativa
NNGACAGCTRN
NYAGCTGTCNN
PBM
Lambert et al.(2019)
pTH10085
0.798
0.914
PK16335.1
M01157_2.00
Cannabis sativa
NNNNKACAGCTRN
NYAGCTGTMNNNN
PBM
Lambert et al.(2019)
pTH10187
0.798
0.914
AtbZIP52
M06746_2.00
Arabidopsis thaliana
DTGMCAGCYBDNHH
DDNHVRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a
0.783
0.845
AtbZIP52
M06747_2.00
Arabidopsis thaliana
DTGMCAGCYKDNHN
NDNHMRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_col_v31
0.783
0.845
BZIP18
M01777_2.00
Arabidopsis thaliana
NDMCARNHNN
NNDNYTGKHN
PBM
Weirauch et al.(2014)
pTH7316
0.783
0.879
BZIP18
M06768_2.00
Arabidopsis thaliana
DTGMCAGCTDD
HHAGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a
0.783
0.879
BZIP18
M06769_2.00
Arabidopsis thaliana
TGMCAGCTKKN
NMMAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP18_col_v31
0.783
0.879
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1367981g001
bZIP
29
86
SDRILANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQRDTTGLSAENA
Links
Other
bZIP
family TFs
Other
Phoenix dactylifera
TFs
99 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OMERI02G19460
Oryza meridionalis
OMERI02G19460
N
PDK_20s1433191g001
Phoenix dactylifera
PDK_20s1433191g001
N
Pavir.J05591
Panicum virgatum
Pavir.J05591
N
TRIUR3_27498
Triticum urartu
TRIUR3_27498
N
Traes_6DL_88259C187
Triticum aestivum
Traes_6DL_88259C187
N
Traes_6BL_1392D6149
Triticum aestivum
Traes_6BL_1392D6149
N
Traes_6AS_0D7F17F06
Triticum aestivum
Traes_6AS_0D7F17F06
N
Si016284m.g
Setaria italica
Si016284m.g
N
Sb04g005902
Sorghum bicolor
Sb04g005902
N
OS02G0539600
Oryza sativa
OS02G0539600
N
ORUFI02G20630
Oryza rufipogon
ORUFI02G20630
N
ORGLA02G0167800
Oryza glaberrima
ORGLA02G0167800
N
ONIVA03G19920
Oryza nivara
ONIVA03G19920
N
Pavir.Ab01874
Panicum virgatum
Pavir.Ab01874
N
OLONG_005200
Oryza longistaminata
OLONG_005200
N
OGLUM02G19870
Oryza glumaepatula
OGLUM02G19870
N
OBART02G19580
Oryza barthii
OBART02G19580
N
OB02G27300
Oryza brachyantha
OB02G27300
N
MLOC_62598
Hordeum vulgare
MLOC_62598
N
LPERR02G15710
Leersia perrieri
LPERR02G15710
N
GRMZM2G326783
Zea mays
GRMZM2G326783
N
GRMZM2G134439
Zea mays
GRMZM2G134439
N
GLYMA06G17980
Glycine max
GLYMA06G17980
N
F775_27241
Aegilops tauschii
F775_27241
N
BRADI3G45230
Brachypodium distachyon
BRADI3G45230
N
BGIOSGA008381
Oryza indica
BGIOSGA008381
N