CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI08G14660
(
Oryza meridionalis
)
C2H2 ZF,MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF01429 (MBD)
IPR007087
IPR001739
OMERI08G14660
T076641_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI08G14660.1
MBD
189
248
GDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNI
OMERI08G14660.1
MBD
557
619
GDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNIEYG
OMERI08G14660.1
C2H2 ZF
676
699
YECQQCNLTFHGQSAYAHHLITFH
OMERI08G14660.1
C2H2 ZF
725
747
FECPVCNKTFEEQSRYFGHVGSH
OMERI08G14660.2
MBD
189
248
GDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNI
OMERI08G14660.2
MBD
557
618
GDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNIEY
OMERI08G14660.2
C2H2 ZF
676
699
YECQQCNLTFHGQSAYAHHLITFH
OMERI08G14660.2
C2H2 ZF
725
747
FECPVCNKTFEEQSRYFGHVGSH
OMERI08G14660.2
C2H2 ZF
1062
1085
YECQQCNLTFHGQSAYAHHLITFH
OMERI08G14660.2
C2H2 ZF
1111
1133
FECPVCNKTFEEQSRYFGHVGSH
OMERI08G14660.3
MBD
189
245
GDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGTISSTV
OMERI08G14660.3
MBD
528
589
GDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNIEY
OMERI08G14660.3
C2H2 ZF
647
670
YECQQCNLTFHGQSAYAHHLITFH
OMERI08G14660.3
C2H2 ZF
696
718
FECPVCNKTFEEQSRYFGHVGSH
OMERI08G14660.3
C2H2 ZF
1033
1056
YECQQCNLTFHGQSAYAHHLITFH
OMERI08G14660.3
C2H2 ZF
1082
1104
FECPVCNKTFEEQSRYFGHVGSH
OMERI08G14660.4
MBD
189
248
GDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNI
OMERI08G14660.4
MBD
557
619
GDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNIEYG
OMERI08G14660.4
C2H2 ZF
676
699
YECQQCNLTFHGQSAYAHHLITFH
OMERI08G14660.4
C2H2 ZF
725
747
FECPVCNKTFEEQSRYFGHVGSH
OMERI08G14660.5
MBD
189
248
GDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNI
OMERI08G14660.5
MBD
557
616
GDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNI
OMERI08G14660.5
C2H2 ZF
676
699
YECQQCNLTFHGQSAYAHHLITFH
OMERI08G14660.5
C2H2 ZF
725
747
FECPVCNKTFEEQSRYFGHVGSH
OMERI08G14660.6
MBD
189
248
GDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNI
OMERI08G14660.6
MBD
485
544
GDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNI
OMERI08G14660.6
C2H2 ZF
604
627
YECQQCNLTFHGQSAYAHHLITFH
OMERI08G14660.6
C2H2 ZF
653
675
FECPVCNKTFEEQSRYFGHVGSH
OMERI08G14660.7
MBD
189
255
GDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNIEYGVQHQ
Links
Other
C2H2 ZF,MBD
family TFs
Other
Oryza meridionalis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy