OMERI08G14660 (Oryza meridionalis)
C2H2 ZF,MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF01429 (MBD) 		IPR007087
IPR001739 		OMERI08G14660 T076641_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI08G14660.1 MBD 189 248
OMERI08G14660.1 MBD 557 619
OMERI08G14660.1 C2H2 ZF 676 699
OMERI08G14660.1 C2H2 ZF 725 747
OMERI08G14660.2 MBD 189 248
OMERI08G14660.2 MBD 557 618
OMERI08G14660.2 C2H2 ZF 676 699
OMERI08G14660.2 C2H2 ZF 725 747
OMERI08G14660.2 C2H2 ZF 1062 1085
OMERI08G14660.2 C2H2 ZF 1111 1133
OMERI08G14660.3 MBD 189 245
OMERI08G14660.3 MBD 528 589
OMERI08G14660.3 C2H2 ZF 647 670
OMERI08G14660.3 C2H2 ZF 696 718
OMERI08G14660.3 C2H2 ZF 1033 1056
OMERI08G14660.3 C2H2 ZF 1082 1104
OMERI08G14660.4 MBD 189 248
OMERI08G14660.4 MBD 557 619
OMERI08G14660.4 C2H2 ZF 676 699
OMERI08G14660.4 C2H2 ZF 725 747
OMERI08G14660.5 MBD 189 248
OMERI08G14660.5 MBD 557 616
OMERI08G14660.5 C2H2 ZF 676 699
OMERI08G14660.5 C2H2 ZF 725 747
OMERI08G14660.6 MBD 189 248
OMERI08G14660.6 MBD 485 544
OMERI08G14660.6 C2H2 ZF 604 627
OMERI08G14660.6 C2H2 ZF 653 675
OMERI08G14660.7 MBD 189 255

Links

Other C2H2 ZF,MBD family TFs
Other Oryza meridionalis TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART08G18610 Oryza barthii OBART08G18610 N 0.940
OS08G0485700 Oryza sativa OS08G0485700 N 0.940
ONIVA08G20630 Oryza nivara ONIVA08G20630 N 0.925
OPUNC08G16580 Oryza punctata OPUNC08G16580 N 0.866
LPERR08G15460 Leersia perrieri LPERR08G15460 N 0.821