AGOS_ABR089C (Ashbya gossypii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 AGOS_ABR089C T080615_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MSN4
M00032_2.00 		Saccharomyces cerevisiae
NYCCCYNN
NNRGGGRN		 PBM
Badis et al.(2008)
MSN4_2121 		0.781 0.848
MSN4
M07462_2.00 		Saccharomyces cerevisiae
CCCCT
AGGGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0342.1 		0.781 0.848
MSN4
M08533_2.00 		Saccharomyces cerevisiae
CCCCT
AGGGG		 Misc
DeBoer et al.(2011)
YKL062W_518 		0.781 0.848
CAGL0M13189g
M01034_2.00 		Candida glabrata
MYCCBBDNN
NNHVVGGRK		 PBM
Siggers et al.(2014)
CAGL0M13189gCgla 		0.781 0.826
KLLA0_F26961g
M01039_2.00 		Kluyveromyces lactis
CYCCYTD
HARGGRG		 PBM
Siggers et al.(2014)
KLLA0F29691gKlac 		0.781 0.826
CAGL0F05995g
M01032_2.00 		Candida glabrata
NYCCYYNN
NNRRGGRN		 PBM
Siggers et al.(2014)
CAGL0F05995gCgla 		0.757 0.761
MSN2
M00036_2.00 		Saccharomyces cerevisiae
NVCCCCTK
MAGGGGBN		 PBM
Badis et al.(2008)
MSN2_2101 		0.757 0.761
MSN2
M07466_2.00 		Saccharomyces cerevisiae
CCCCY
RGGGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0341.1 		0.757 0.761
MSN2
M08538_2.00 		Saccharomyces cerevisiae
NHYCCKN
NMGGRDN		 Misc
DeBoer et al.(2011)
YMR037C_1380 		0.757 0.761
MSN2
M10399_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MSN2_Q4 		0.757 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAS50859 C2H2 ZF 504 527
AAS50859 C2H2 ZF 533 555

Links

Other C2H2 ZF family TFs
Other Ashbya gossypii TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA11G14670 Glycine max GLYMA11G14670 N
GLYMA12G06630 Glycine max GLYMA12G06630 N
GLYMA13G41261 Glycine max GLYMA13G41261 N
GLYMA15G04160 Glycine max GLYMA15G04160 N
GLYMA15G04166 Glycine max GLYMA15G04166 N
MTR_2g097463 Medicago truncatula MTR_2g097463 N
MTR_2g097467 Medicago truncatula MTR_2g097467 N
MTR_2g097473 Medicago truncatula MTR_2g097473 N
PRUPE_ppa002166mg Prunus persica PRUPE_ppa002166mg N
Ca_02626 Cicer arietinum Ca_02626 N
Ca_16293 Cicer arietinum Ca_16293 N
Pm000712 Prunus mume Pm000712 N
chr3.CM0792.420.nd Lotus japonicus chr3.CM0792.420.nd N
LjSGA_084059.1 Lotus japonicus LjSGA_084059.1 N