CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa002166mg
(
Prunus persica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
PRUPE_ppa002166mg
T201264_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ12524
GRAS
332
704
LSTLLTQCAQAVASYDQRTASELLKQIRQHSSPYGDATQRSAHYFADGLEARLAGARTPSYSPLVSMQISAAEILKAHEVYVTSSPFKKLSNFLANRTILKLAEKATRLHVIDFGISYGFQWPCFIHRLSERPGGPPKLRITAIELPQPGFRPTERVEETGRRLEKYAERFNVPFEYNVIAQKWETIQFEDLKIDRNEVIVVNCMNRLKHMPDETVMVNSPRDIVLKLIKKINPDLFIHGVVNGTYNSPFFVTRFKEALFHFSALFDMFEASVPREDERRLLFEKAVYGRDILNVVACEGLERVERPETYKQWQVRNVRAGFKQLPLDQELLKRVKRMLKFMGYHNDFSIDEDGHWMLQGWKGRITRALSFWK
Links
Other
GRAS
family TFs
Other
Prunus persica
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm000717
Prunus mume
Pm000717
N
0.965
PRUPE_ppa019574mg
Prunus persica
PRUPE_ppa019574mg
N
0.954
PRUPE_ppa002472mg
Prunus persica
PRUPE_ppa002472mg
N
0.924
PRUPE_ppa026849mg
Prunus persica
PRUPE_ppa026849mg
N
0.924
Pm000716
Prunus mume
Pm000716
N
0.922
Pm000713
Prunus mume
Pm000713
N
0.824
MDP0000796348
Malus domestica
MDP0000796348
N
0.822
MDP0000287041
Malus domestica
MDP0000287041
N
0.805
MDP0000851230
Malus domestica
MDP0000851230
N
0.805
PRUPE_ppa002392mg
Prunus persica
PRUPE_ppa002392mg
N
0.797
MDP0000289783
Malus domestica
MDP0000289783
N
0.795
PRUPE_ppa002701mg
Prunus persica
PRUPE_ppa002701mg
N
0.759
SapurV1A.0040s0520
Salix purpurea
SapurV1A.0040s0520
N
0.758
Pm000714
Prunus mume
Pm000714
N
0.757
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.750
PRUPE_ppa014789mg
Prunus persica
PRUPE_ppa014789mg
N
0.743
gene30178-v1.0-hybrid
Fragaria vesca
gene30178-v1.0-hybrid
N
0.741
evm.TU.supercontig_81.122
Carica papaya
evm.TU.supercontig_81.122
N
0.728
cassava34369.m1
Manihot esculenta
cassava34369.m1
N
0.724
SapurV1A.0041s0200
Salix purpurea
SapurV1A.0041s0200
N
0.719
POPTR_0001s24890
Populus trichocarpa
POPTR_0001s24890
N
0.716
POPTR_0009s03850
Populus trichocarpa
POPTR_0009s03850
N
0.714
28650.m000187
Ricinus communis
28650.m000187
N
0.711
GLYMA12G06630
Glycine max
GLYMA12G06630
N
0.708
GLYMA11G14670
Glycine max
GLYMA11G14670
N
0.706
chr3.CM0792.420.nd
Lotus japonicus
chr3.CM0792.420.nd
N
0.706
TCM_041810
Theobroma cacao
TCM_041810
N
0.703
orange1.1g039114m.g
Citrus sinensis
orange1.1g039114m.g
N
0.703
Pm000712
Prunus mume
Pm000712
N
0.702
MTR_4g064200
Medicago truncatula
MTR_4g064200
N
0.700
Ciclev10029999m.g
Citrus clementina
Ciclev10029999m.g
N
0.700
Gorai.003G130400
Gossypium raimondii
Gorai.003G130400
N
0.700