CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa026849mg
(
Prunus persica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
PRUPE_ppa026849mg
T201305_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ09694
GRAS
302
674
LSTLLTQCAQAVASYEQRTASELLKQIRQHSSPYGDATQRLAHYFADGLEARLAGARTPSYSPLISMQISAAEILKAYEVFVTSSPFRTVSNFLANRTILKLAEKATRLHVIDFGISYGFQWPCFIQRLSKRPGGPPKLRITAIELPQPGFRPTEKVEETGRRLKKYAERFNVPFEYNVIAQKWETIQFEDLKIDRNEMIVVNCMNRLRHIPDETVMVNSPRDIVLKLIKKINPDLFIHGVVNGTYNSPFFVTRFREALFHFSALFDVFEASVPREDERRLMFEKAVYGKDILNVVACEGLERVERPETYKQWQVRNVRAGFKQLPLDQEILKKVERMLKFMGYHNDFRIDEEGHWILQGWKGRTIMALSFWK
Links
Other
GRAS
family TFs
Other
Prunus persica
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm000716
Prunus mume
Pm000716
N
0.954
PRUPE_ppa002472mg
Prunus persica
PRUPE_ppa002472mg
N
0.943
PRUPE_ppa019574mg
Prunus persica
PRUPE_ppa019574mg
N
0.941
PRUPE_ppa002166mg
Prunus persica
PRUPE_ppa002166mg
N
0.924
Pm000717
Prunus mume
Pm000717
N
0.916
Pm000713
Prunus mume
Pm000713
N
0.824
PRUPE_ppa002392mg
Prunus persica
PRUPE_ppa002392mg
N
0.815
MDP0000796348
Malus domestica
MDP0000796348
N
0.808
MDP0000287041
Malus domestica
MDP0000287041
N
0.789
MDP0000851230
Malus domestica
MDP0000851230
N
0.789
MDP0000289783
Malus domestica
MDP0000289783
N
0.781
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.775
gene30178-v1.0-hybrid
Fragaria vesca
gene30178-v1.0-hybrid
N
0.741
SapurV1A.0040s0520
Salix purpurea
SapurV1A.0040s0520
N
0.733
PRUPE_ppa002701mg
Prunus persica
PRUPE_ppa002701mg
N
0.730
Pm000714
Prunus mume
Pm000714
N
0.727
PRUPE_ppa014789mg
Prunus persica
PRUPE_ppa014789mg
N
0.719
evm.TU.supercontig_81.122
Carica papaya
evm.TU.supercontig_81.122
N
0.716
28650.m000187
Ricinus communis
28650.m000187
N
0.714
cassava34369.m1
Manihot esculenta
cassava34369.m1
N
0.714
orange1.1g045051m.g
Citrus sinensis
orange1.1g045051m.g
N
0.711
Ciclev10027926m.g
Citrus clementina
Ciclev10027926m.g
N
0.708
POPTR_0001s24890
Populus trichocarpa
POPTR_0001s24890
N
0.700
POPTR_0009s03850
Populus trichocarpa
POPTR_0009s03850
N
0.700