CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0040s0520
(
Salix purpurea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
SapurV1A.0040s0520
T203117_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0040s0520.1.p
GRAS
336
703
SSSLLIQCAQAVAIGDQRTASELLQQIRQHSSPHGDANQRLAHYFADALDTRLAGTATPAFTLFVSPRTSAADILKAYQVYVRACPFKRMSNFFANRTILKLEKKATRLHIIDFGILYGFQWPCLIQRLSERPGGPPKLRITGIELPQPGFRPAERVEETGRRLERFKVPFEYIAIAQKWETIRYEDLKIDKDEKVVVNCLYRLRNLPDDTIVENSARDAVLKLINEIKPDMFIHGVVNGNFNAPFFVTRFREALYHFSSLFDMFEATVSRKDEHRMLFEKEQYGRDITNVIACEGKARVERPETYKQWQSRNLRAGFTQLPLDKELFKDVRSVVKSEYDKDFVVDADGQWVLQGWKGRIIYALSIWK
SapurV1A.0040s0520.2.p
GRAS
336
502
SSSLLIQCAQAVAIGDQRTASELLQQIRQHSSPHGDANQRLAHYFADALDTRLAGTATPAFTLFVSPRTSAADILKAYQVYVRACPFKRMSNFFANRTILKLEKKATRLHIIDFGILYGFQWPCLIQRLSERPGGPPKLRITGIELPQPGFRPAERVEETGRRLERY
SapurV1A.0040s0520.3.p
GRAS
321
487
SSSLLIQCAQAVAIGDQRTASELLQQIRQHSSPHGDANQRLAHYFADALDTRLAGTATPAFTLFVSPRTSAADILKAYQVYVRACPFKRMSNFFANRTILKLEKKATRLHIIDFGILYGFQWPCLIQRLSERPGGPPKLRITGIELPQPGFRPAERVEETGRRLERY
SapurV1A.0040s0520.4.p
GRAS
297
463
SSSLLIQCAQAVAIGDQRTASELLQQIRQHSSPHGDANQRLAHYFADALDTRLAGTATPAFTLFVSPRTSAADILKAYQVYVRACPFKRMSNFFANRTILKLEKKATRLHIIDFGILYGFQWPCLIQRLSERPGGPPKLRITGIELPQPGFRPAERVEETGRRLERY
Links
Other
GRAS
family TFs
Other
Salix purpurea
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0009s03850
Populus trichocarpa
POPTR_0009s03850
N
0.945
POPTR_0001s24890
Populus trichocarpa
POPTR_0001s24890
N
0.885
SapurV1A.0041s0200
Salix purpurea
SapurV1A.0041s0200
N
0.848
28650.m000187
Ricinus communis
28650.m000187
N
0.806
cassava34369.m1
Manihot esculenta
cassava34369.m1
N
0.770
PRUPE_ppa002166mg
Prunus persica
PRUPE_ppa002166mg
N
0.758
PRUPE_ppa002472mg
Prunus persica
PRUPE_ppa002472mg
N
0.745
PRUPE_ppa019574mg
Prunus persica
PRUPE_ppa019574mg
N
0.745
PRUPE_ppa026849mg
Prunus persica
PRUPE_ppa026849mg
N
0.733
TCM_041810
Theobroma cacao
TCM_041810
N
0.733
evm.TU.supercontig_81.122
Carica papaya
evm.TU.supercontig_81.122
N
0.733
Gorai.003G130400
Gossypium raimondii
Gorai.003G130400
N
0.733
Pm000713
Prunus mume
Pm000713
N
0.727
Cucsa.117770
Cucumis sativus
Cucsa.117770
N
0.727
Lus10040787.g
Linum usitatissimum
Lus10040787.g
N
0.721
Gorai.009G098100
Gossypium raimondii
Gorai.009G098100
N
0.715
GLYMA12G06630
Glycine max
GLYMA12G06630
N
0.709
VIT_08s0007g00510
Vitis vinifera
VIT_08s0007g00510
N
0.709
28650.m000189
Ricinus communis
28650.m000189
N
0.709
Ciclev10011141m.g
Citrus clementina
Ciclev10011141m.g
N
0.709
PK01612.1
Cannabis sativa
PK01612.1
N
0.709
VIT_06s0004g04960
Vitis vinifera
VIT_06s0004g04960
N
0.703
Pm000712
Prunus mume
Pm000712
N
0.702
Pm000717
Prunus mume
Pm000717
N
0.700