CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.003G130400
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.003G130400
T202611_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.003G130400.1
GRAS
264
635
LWSLLTQCAQAVAINDQRTANELLKQISQNSSTTGDGTQRFANYFADALTTRLAGMGAPSYSPLVSNRTSAADILKAYRVLVLACPFKKMMHFYANKKIMKVAEKATTLHIVDFGICYGFQWPCLIQRLSARAGGPPKLRITGIEFPQPGFRPAERVEETGRRLKRYCERFKVPFEYNVIAKKWETIQLEELKIKKDEVVIVNCMYRLKNLPDDTLSSTSARDIVLKLIRSINPEFFIHGISNGTYNAPFFVTRFREALFHFSAIFDIFEANVPRDDPQRMMFEREILGRDIMNVVACEGIERVERPETYKQWQARTLRAGFKQIPLDQELVKKVTNMVQSNYHRDFIIDVDGRWMLQGWKGRVIFALSCWK
Gorai.003G130400.2
GRAS
237
608
LWSLLTQCAQAVAINDQRTANELLKQISQNSSTTGDGTQRFANYFADALTTRLAGMGAPSYSPLVSNRTSAADILKAYRVLVLACPFKKMMHFYANKKIMKVAEKATTLHIVDFGICYGFQWPCLIQRLSARAGGPPKLRITGIEFPQPGFRPAERVEETGRRLKRYCERFKVPFEYNVIAKKWETIQLEELKIKKDEVVIVNCMYRLKNLPDDTLSSTSARDIVLKLIRSINPEFFIHGISNGTYNAPFFVTRFREALFHFSAIFDIFEANVPRDDPQRMMFEREILGRDIMNVVACEGIERVERPETYKQWQARTLRAGFKQIPLDQELVKKVTNMVQSNYHRDFIIDVDGRWMLQGWKGRVIFALSCWK
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_041810
Theobroma cacao
TCM_041810
N
0.873
Gorai.009G098100
Gossypium raimondii
Gorai.009G098100
N
0.846
Gorai.004G005200
Gossypium raimondii
Gorai.004G005200
N
0.741
SapurV1A.0040s0520
Salix purpurea
SapurV1A.0040s0520
N
0.733
cassava34369.m1
Manihot esculenta
cassava34369.m1
N
0.716
28650.m000187
Ricinus communis
28650.m000187
N
0.708
Ciclev10027940m.g
Citrus clementina
Ciclev10027940m.g
N
0.705
evm.TU.supercontig_81.122
Carica papaya
evm.TU.supercontig_81.122
N
0.705
POPTR_0009s03850
Populus trichocarpa
POPTR_0009s03850
N
0.703
PRUPE_ppa002472mg
Prunus persica
PRUPE_ppa002472mg
N
0.703
PRUPE_ppa019574mg
Prunus persica
PRUPE_ppa019574mg
N
0.703
PRUPE_ppa002166mg
Prunus persica
PRUPE_ppa002166mg
N
0.700