CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.004G005200
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.004G005200
T202616_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.004G005200.1
GRAS
196
558
FMESLTQCAQSVAVNDQRTANEMLKLIRQHSSEFGDGTQRSAHDFANALTTRLAGMGAPLFFAHLLSNRTSAADALKAYGVYVLACPFKKMSNFYANKRIMELAEKATTLHIIDFGICYGFQWPCLIQLLSAQAGGPSKLRITGSSSHNQVSDLQKGYCERFNVLFKCNVIAKKWETIQLEELKITKDEVVVVNCMHRLKNLPDDTVSPTSARETVLKLIRSINPELFIHGVANGTYNAPFFFSRFRKALFHFSAQFDIFEATVAQDDPQRMMFEKEIHGRDIMNLVACEGTERVERPETYKQWQVRTLRTGFKQVPLNQELVKKVMDMVQSSYHRDFVVDVDGHWMLQGWKGRIIYALSCWK
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_041810
Theobroma cacao
TCM_041810
N
0.780
Traes_5AL_9AE0ED26A
Triticum aestivum
Traes_5AL_9AE0ED26A
N
0.757
Gorai.003G130400
Gossypium raimondii
Gorai.003G130400
N
0.741
Gorai.009G098100
Gossypium raimondii
Gorai.009G098100
N
0.735