CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm000717
(
Prunus mume
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pm000717
T201949_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm000717
GRAS
324
696
LSTLLTQCAQAVASYDRRTASELLKQIRQHSSPYGDATQRLAHYFADGLEARLAGARTPSYSPLVSMQISAAEILKAHEVYVTSSPFKNMSNFMANSTILKLAEKATRLHVIDFGISYGFQWPCFIHRLSERLGGPPMLRITAIELPQPGFRPTERVEETGRRLKKYAERFNVPFEYNVIAQKWETIQFEDLKIDRNEVIVVNCMNRLKHIPDETVMVNSPRDIVLKLIKKINPDLFIHGVVNGTYNSPFFVTRFREALFHFSALFDMFEASVPHEDERRLLFEKAQYGRDILNVVACEGLERVERPETYKQWQVRNVRAGFKQLPLDQELLKRVKRMLKFMGYHNDFSIDEDGHWMLQGWKGRITRALSFWK
Links
Other
GRAS
family TFs
Other
Prunus mume
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa002166mg
Prunus persica
PRUPE_ppa002166mg
N
0.965
PRUPE_ppa019574mg
Prunus persica
PRUPE_ppa019574mg
N
0.938
PRUPE_ppa002472mg
Prunus persica
PRUPE_ppa002472mg
N
0.919
Pm000716
Prunus mume
Pm000716
N
0.919
PRUPE_ppa026849mg
Prunus persica
PRUPE_ppa026849mg
N
0.916
Pm000713
Prunus mume
Pm000713
N
0.819
MDP0000796348
Malus domestica
MDP0000796348
N
0.819
MDP0000287041
Malus domestica
MDP0000287041
N
0.805
MDP0000851230
Malus domestica
MDP0000851230
N
0.805
PRUPE_ppa002392mg
Prunus persica
PRUPE_ppa002392mg
N
0.792
MDP0000289783
Malus domestica
MDP0000289783
N
0.789
PRUPE_ppa002701mg
Prunus persica
PRUPE_ppa002701mg
N
0.754
Pm000714
Prunus mume
Pm000714
N
0.751
PRUPE_ppa014789mg
Prunus persica
PRUPE_ppa014789mg
N
0.738
SapurV1A.0041s0200
Salix purpurea
SapurV1A.0041s0200
N
0.719
cassava34369.m1
Manihot esculenta
cassava34369.m1
N
0.714
POPTR_0001s24890
Populus trichocarpa
POPTR_0001s24890
N
0.711
28650.m000187
Ricinus communis
28650.m000187
N
0.711
POPTR_0009s03850
Populus trichocarpa
POPTR_0009s03850
N
0.708
TCM_041810
Theobroma cacao
TCM_041810
N
0.700
SapurV1A.0040s0520
Salix purpurea
SapurV1A.0040s0520
N
0.700