CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm000713
(
Prunus mume
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pm000713
T201945_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm000713
GRAS
333
705
FSTLLTQCAQAVASYDQRTASELLKQIRKHSSPYGDAAERLAHYFADGLEARLAGTRTPLYSPLLSIQTPAAEILKAYQLYVTHCPYKKMLHFFSNRTIMKLAEKATRLHIIDFGISYGFQWPCFIQRLSKRPGGPPNIRMTAIELPQPGFRPTERVEETGRRLDKYAKRFNVPFQYKVIAQKWETIQFEDLKIDRDELIVVNCMHRLKHIPDETVMASSPRDTVLKLIKRINPDLYIHGVINGAYNSPFFLTRFREALFHFSAQFDMFEATIPREDEQRLMFEKAVFGKDIMNVIACEGLERVERPETYKQWQVRYQRAGFKQLPLDQELLKKVKTMLKVMGYHNDFRIDEDGHWMLQGWKGRIIMGLAFWK
Links
Other
GRAS
family TFs
Other
Prunus mume
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa002392mg
Prunus persica
PRUPE_ppa002392mg
N
0.975
MDP0000796348
Malus domestica
MDP0000796348
N
0.868
MDP0000287041
Malus domestica
MDP0000287041
N
0.841
MDP0000851230
Malus domestica
MDP0000851230
N
0.841
PRUPE_ppa002166mg
Prunus persica
PRUPE_ppa002166mg
N
0.824
PRUPE_ppa026849mg
Prunus persica
PRUPE_ppa026849mg
N
0.824
PRUPE_ppa019574mg
Prunus persica
PRUPE_ppa019574mg
N
0.822
Pm000716
Prunus mume
Pm000716
N
0.822
PRUPE_ppa002472mg
Prunus persica
PRUPE_ppa002472mg
N
0.819
Pm000717
Prunus mume
Pm000717
N
0.819
MDP0000289783
Malus domestica
MDP0000289783
N
0.811
PRUPE_ppa002701mg
Prunus persica
PRUPE_ppa002701mg
N
0.743
Pm000714
Prunus mume
Pm000714
N
0.735
PRUPE_ppa014789mg
Prunus persica
PRUPE_ppa014789mg
N
0.730
SapurV1A.0040s0520
Salix purpurea
SapurV1A.0040s0520
N
0.727
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.725
cassava34369.m1
Manihot esculenta
cassava34369.m1
N
0.705
evm.TU.supercontig_81.122
Carica papaya
evm.TU.supercontig_81.122
N
0.705
28650.m000187
Ricinus communis
28650.m000187
N
0.703