CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_4g064200
(
Medicago truncatula
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
MTR_4g064200
T200545_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES88870
GRAS
281
650
LWTLLTQCAQAVGSYDQRNANDILKQIRQHSSPSGDGLQRLAHYFADGLEARLSAGTPMYKLLQSSSAADMLRAHKVYITASPFQRMSNFLANRTILKLVENKSSLHIIDFGVFYGFQWPCLIQRLSERSGGPPRLRITGIDLPQPGFRPAERVEETGRRLVKYCKRFGVPFEYNCLAQKWDTLRLEDLKIDREEVTVVNCLHRLKNVSDETVTENCPRDAVLRLIRRINPNIFIHGVVNGTYNAPFFLTRFREALFHFSSLFDMLEATVPREDDQYRLMIEKGLFGRDAVNVIACEGAERVERPETYKQWQVRNKRARFKQLPLAPELVDRVKEMVKKEYPKDFVVDEDGKWVLQGWKGRILLAVSCWV
Links
Other
GRAS
family TFs
Other
Medicago truncatula
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_16293
Cicer arietinum
Ca_16293
N
0.921
chr3.CM0792.420.nd
Lotus japonicus
chr3.CM0792.420.nd
N
0.877
GLYMA12G06630
Glycine max
GLYMA12G06630
N
0.837
GLYMA11G14670
Glycine max
GLYMA11G14670
N
0.831
GLYMA15G04160
Glycine max
GLYMA15G04160
N
0.747
GLYMA13G41261
Glycine max
GLYMA13G41261
N
0.744
Ca_02626
Cicer arietinum
Ca_02626
N
0.741
GLYMA15G04166
Glycine max
GLYMA15G04166
N
0.733
MTR_2g097463
Medicago truncatula
MTR_2g097463
N
0.719
MTR_2g097467
Medicago truncatula
MTR_2g097467
N
0.714
MTR_2g097473
Medicago truncatula
MTR_2g097473
N
0.708
Pm000712
Prunus mume
Pm000712
N
0.708
LjSGA_084059.1
Lotus japonicus
LjSGA_084059.1
N
0.701
PRUPE_ppa002166mg
Prunus persica
PRUPE_ppa002166mg
N
0.700