STOP2 (Arabidopsis thaliana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 AT5G22890 T080879_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP2
M06820_2.00		 Arabidopsis thaliana
YAGATAHMACCTNHNHND
HNDNDNAGGTKDTATCTR		 Dap-seq
OMalley et al.(2016)
At5g22890_col_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G22890.1 C2H2 ZF 306 328
AT5G22890.1 C2H2 ZF 329 358

Links

Other C2H2 ZF family TFs
Other Arabidopsis thaliana TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
hlh-30 Caenorhabditis elegans WBGene00020930 D
OESDEN_00871 Oesophagostomum dentatum OESDEN_00871 I
L893_g28705 Steinernema glaseri L893_g28705 I
L898_g15395 Steinernema monticolum L898_g15395 I
maker-nMf.1.1.scaf11370-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf11370-augustus-gene-0.3 I
MhA1_Contig2854.frz3.gene1 Meloidogyne hapla MhA1_Contig2854.frz3.gene1 I
nAv.1.0.1.g01464 Acanthocheilonema viteae nAv.1.0.1.g01464 I
NBR_0000419201 Nippostrongylus brasiliensis NBR_0000419201 I
nDi.2.2.2.g10686 Dirofilaria immitis nDi.2.2.2.g10686 I
nLs.2.1.2.g08330 Litomosoides sigmodontis nLs.2.1.2.g08330 I
nOo.2.0.1.g06941 Onchocerca ochengi nOo.2.0.1.g06941 I
L892_g6408 Steinernema scapterisci L892_g6408 I
PEQ_0000740201 Parascaris equorum PEQ_0000740201 I
PTRK_0001632300 Parastrongyloides trichosuri PTRK_0001632300 I
RSKR_0000797400 Rhabditophanes kr3021 RSKR_0000797400 I
scaffold257-EXSNAP2012.8 Pristionchus exspectatus scaffold257-EXSNAP2012.8 I
SSTP_0000449500 Strongyloides stercoralis SSTP_0000449500 I
SVE_0222900 Strongyloides venezuelensis SVE_0222900 I
TCLT_0000727601 Thelazia callipaeda TCLT_0000727601 I
ACOC_0000571601 Angiostrongylus costaricensis ACOC_0000571601 I
Bm6133 Brugia malayi Bm6133 I
CBG05364 Caenorhabditis briggsae CBG05364 I
CBG24924 Caenorhabditis briggsae CBG24924 I
CBN07317 Caenorhabditis brenneri CBN07317 I
CRE27827 Caenorhabditis remanei CRE27827 I
WBGene00240746 Onchocerca volvulus WBGene00240746 I
Minc08733 Meloidogyne incognita Minc08733 I
ACAC_0001364601 Angiostrongylus cantonensis ACAC_0001364601 I
WUBG_15170 Wuchereria bancrofti WUBG_15170 I
ANCCEY_12664 Ancylostoma ceylanicum ANCCEY_12664 I
ASIM_0001200001 Anisakis simplex ASIM_0001200001 I
DICVIV_03673 Dictyocaulus viviparus DICVIV_03673 I
DME_0000936301 Dracunculus medinensis DME_0000936301 I
EEL_0001011701 Elaeophora elaphi EEL_0001011701 I
L596_g25887 Steinernema carpocapsae L596_g25887 I
L889_g31943 Steinernema feltiae L889_g31943 I
SMUV_0000920101 Syphacia muris SMUV_0000920101 N
EVEC_0000993501 Enterobius vermicularis EVEC_0000993501 N