Bo7g010020 (Brassica oleracea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Bo7g010020 T081763_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G22990
M06821_2.00 		Arabidopsis thaliana
WCGWHDTCGWYNHNN
NNDNRWCGAHDWCGW		 Dap-seq
OMalley et al.(2016)
AT5G22990_col_a 		0.827 0.913
AT2G15740
M06810_2.00 		Arabidopsis thaliana
WCGHHDYCGWY
RWCGRHDDCGW		 Dap-seq
OMalley et al.(2016)
AT2G15740_col_a 		0.825 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g010020.1 C2H2 ZF 102 124

Links

Other C2H2 ZF family TFs
Other Brassica oleracea TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TTHERM_00202940 Tetrahymena thermophila TTHERM_00202940 D
GSPATT00026886001 Paramecium tetraurelia GSPATT00026886001 I
GSPATT00028733001 Paramecium tetraurelia GSPATT00028733001 I
GSPATT00028898001 Paramecium tetraurelia GSPATT00028898001 I
TTHERM_00721600 Tetrahymena thermophila TTHERM_00721600 I
TTHERM_01009970 Tetrahymena thermophila TTHERM_01009970 I
Contig1106.1.g91 Oxytricha trifallax Contig1106.1.g91 N
Contig15259.0.g17 Oxytricha trifallax Contig15259.0.g17 N