CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GSPATT00028898001
(
Paramecium tetraurelia
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GSPATT00028898001
T272970_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TTHERM_00202940
M02335_2.00
Tetrahymena thermophila
NNRDATCYN
NRGATHYNN
PBM
Weirauch et al.(2014)
pTH8726
0.700
0.761
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAK57863
Myb
22
67
QGRWIKEEHQRFVEALSLHGKNWKKVEEYVGTRSGAQIRSHAQKFF
Links
Other
Myb/SANT
family TFs
Other
Paramecium tetraurelia
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSPATT00035849001
Paramecium tetraurelia
GSPATT00035849001
I
0.909
GSPATT00026886001
Paramecium tetraurelia
GSPATT00026886001
I
0.849
GSPATT00028733001
Paramecium tetraurelia
GSPATT00028733001
I
0.831
TTHERM_01009970
Tetrahymena thermophila
TTHERM_01009970
I
0.817
Contig1106.1.g91
Oxytricha trifallax
Contig1106.1.g91
N
0.747
TTHERM_00721600
Tetrahymena thermophila
TTHERM_00721600
I
0.733
TTHERM_00202940
Tetrahymena thermophila
TTHERM_00202940
D
0.700
Contig15259.0.g17
Oxytricha trifallax
Contig15259.0.g17
N
0.698