CapteG19364 (Capitella teleta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CapteG19364 T082675_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Kah
M03690_2.00 		Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN		 SELEX
Nitta et al.(2015)
CG17181_1 		0.763 0.850
Kah
M06137_2.00 		Drosophila melanogaster
VCCACCTGT
ACAGGTGGB		 B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144 		0.763 0.850
Kah
M06138_2.00 		Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN		 B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144 		0.763 0.850
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CapteP19364 C2H2 ZF 169 191
CapteP19364 C2H2 ZF 201 222
CapteP19364 C2H2 ZF 226 248
CapteP19364 C2H2 ZF 254 276
CapteP19364 C2H2 ZF 282 303

Links

Other C2H2 ZF family TFs
Other Capitella teleta TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-piw_contig_3307-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_3307-fgenesh-gene-0.1 N 0.000
fgenesh1_pg.C_scaffold_26000008 Phytophthora capsici fgenesh1_pg.C_scaffold_26000008 N 0.000
estExt_fgenesh1_kg.C_260006 Phytophthora capsici estExt_fgenesh1_kg.C_260006 N 0.000
PYU1_G003105 Pythium ultimum PYU1_G003105 N 0.000
PYU1_G003104 Pythium ultimum PYU1_G003104 N 0.000
PITG_19362 Phytophthora infestans PITG_19362 N 0.000
PITG_19361 Phytophthora infestans PITG_19361 N 0.000
PITG_11731 Phytophthora infestans PITG_11731 N 0.000
Physo131312 Phytophthora sojae Physo131312 N 0.000
Phyra73306 Phytophthora ramorum Phyra73306 N 0.000
Phyra73305 Phytophthora ramorum Phyra73305 N 0.000
maker-pve_contig_603-snap-gene-0.9 Pythium vexans maker-pve_contig_603-snap-gene-0.9 N 0.000
maker-pve_contig_603-fgenesh-gene-0.5 Pythium vexans maker-pve_contig_603-fgenesh-gene-0.5 N 0.000
ALNC14_098180 Albugo laibachii ALNC14_098180 N 0.000
maker-piw_contig_3307-fgenesh-gene-0.0 Pythium iwayamai maker-piw_contig_3307-fgenesh-gene-0.0 N 0.000
maker-pir_contig_142-fgenesh-gene-0.5 Pythium irregulare maker-pir_contig_142-fgenesh-gene-0.5 N 0.000
maker-par_contig_173-fgenesh-gene-0.4 Pythium arrhenomanes maker-par_contig_173-fgenesh-gene-0.4 N 0.000
maker-pag1_scaffold_151-fgenesh-gene-0.9 Pythium aphanidermatum maker-pag1_scaffold_151-fgenesh-gene-0.9 N 0.000
HpaG811475 Hyaloperonospora arabidopsidis HpaG811475 N 0.000
fgenesh_scip_prom.46568.8839 Phytophthora kernoviae fgenesh_scip_prom.46568.8839 N 0.000
fgenesh_scip_prom.28083.12018 Phytophthora lateralis fgenesh_scip_prom.28083.12018 N 0.000
fgenesh_scip_prom.28083.12017 Phytophthora lateralis fgenesh_scip_prom.28083.12017 N 0.000
fgenesh_masked-pir_contig_142-abinit-gene-0.47 Pythium irregulare fgenesh_masked-pir_contig_142-abinit-gene-0.47 N 0.000
F443_03223 Phytophthora parasitica F443_03223 N 0.000
F443_03220 Phytophthora parasitica F443_03220 N 0.000
ALNC14_114790 Albugo laibachii ALNC14_114790 N 0.000