CBN22561 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN22561 T083063_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ces-1
M00608_2.00 		Caenorhabditis elegans
CCTGTTG
CAACAGG		 PBM
Narasimhan et al.(2015)
pTH9158 		0.818 0.947
ces-1
M09518_2.00 		Caenorhabditis elegans
NWAATYNRATTW
WAATYNRATTWN		 Misc
Heinz et al.(2010)
cElegans-L1-CES1_modEncode 		0.818 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN22561 C2H2 ZF 121 143
CBN22561 C2H2 ZF 152 174
CBN22561 C2H2 ZF 178 200
CBN22561 C2H2 ZF 206 228
CBN22561 C2H2 ZF 234 255

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSSTOG00000024678 Ictidomys tridecemlineatus ENSSTOG00000024678 N
ENSOARG00000008464 Ovis aries ENSOARG00000008464 N
ENSOCUG00000029356 Oryctolagus cuniculus ENSOCUG00000029356 N
MYSM1 Otolemur garnettii ENSOGAG00000004571 N
ENSONIG00000002787 Oreochromis niloticus ENSONIG00000002787 N
ENSPANG00000021852 Papio anubis ENSPANG00000021852 N
ENSPPYG00000001296 Pongo abelii ENSPPYG00000001296 N
ENSPSIG00000003847 Pelodiscus sinensis ENSPSIG00000003847 N
MYSM1 Pan troglodytes ENSPTRG00000000796 N
MYSM1 Pteropus vampyrus ENSPVAG00000012800 N
Mysm1 Rattus norvegicus ENSRNOG00000026299 N
MYSM1 Sorex araneus ENSSARG00000003002 N
ENSSHAG00000013607 Sarcophilus harrisii ENSSHAG00000013607 N
MYSM1 Sus scrofa ENSSSCG00000003830 N
ENSNLEG00000014766 Nomascus leucogenys ENSNLEG00000014766 N
ENSTGUG00000009663 Taeniopygia guttata ENSTGUG00000009663 N
ENSTSYG00000003664 Tarsius syrichta ENSTSYG00000003664 N
MYSM1 Tursiops truncatus ENSTTRG00000005999 N
MYSM1 Vicugna pacos ENSVPAG00000007237 N
Aan_R000627 Calypte anna Aan_R000627 N
ENSP00000418734-D1 Bos grunniens ENSP00000418734-D1 N
ENSP00000418734 Macaca fascicularis ENSP00000418734 N
Gfo_R010197 Geospiza fortis Gfo_R010197 N
Myotis_brandtii_MYSM1_10020945 Myotis brandtii Myotis_brandtii_MYSM1_10020945 N
Ogr14877 Ophisaurus gracilis Ogr14877 N
Pvit_02365 Pogona vitticeps Pvit_02365 N
mysm1 Xenopus tropicalis XB-GENE-1032957 N
mysm1.L Xenopus laevis XB-GENE-1032962 N
MYSM1 Homo sapiens ENSG00000162601 N
ENSAMEG00000000263 Ailuropoda melanoleuca ENSAMEG00000000263 N
ENSAMXG00000013289 Astyanax mexicanus ENSAMXG00000013289 N
MYSM1 Bos taurus ENSBTAG00000013961 N
MYSM1 Choloepus hoffmanni ENSCHOG00000006619 N
MYSM1 Callithrix jacchus ENSCJAG00000016020 N
MYSM1 Cavia porcellus ENSCPOG00000006557 N
ENSCSAG00000001326 Chlorocebus sabaeus ENSCSAG00000001326 N
mysm1 Danio rerio ENSDARG00000034693 N
MYSM1 Dasypus novemcinctus ENSDNOG00000009991 N
ENSDORG00000005983 Dipodomys ordii ENSDORG00000005983 N
MYSM1 Equus caballus ENSECAG00000024212 N
ENSFALG00000012350 Ficedula albicollis ENSFALG00000012350 N
MYSM1 Felis catus ENSFCAG00000026572 N
MYSM1 Anolis carolinensis ENSACAG00000005486 N
mysm1 Gasterosteus aculeatus ENSGACG00000001511 N
MYSM1 Gallus gallus ENSGALG00000010869 N
MYSM1 Gorilla gorilla ENSGGOG00000005238 N
ENSLACG00000002536 Latimeria chalumnae ENSLACG00000002536 N
MYSM1 Loxodonta africana ENSLAFG00000003849 N
ENSLOCG00000008884 Lepisosteus oculatus ENSLOCG00000008884 N
MYSM1 Meleagris gallopavo ENSMGAG00000011514 N
MYSM1 Myotis lucifugus ENSMLUG00000001665 N
MYSM1 Macaca mulatta ENSMMUG00000011800 N
MYSM1 Monodelphis domestica ENSMODG00000003341 N
ENSMPUG00000007462 Mustela putorius furo ENSMPUG00000007462 N
Mysm1 Mus musculus ENSMUSG00000062627 N