CBN22561 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN22561 T083063_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ces-1
M00608_2.00 		Caenorhabditis elegans
CCTGTTG
CAACAGG		 PBM
Narasimhan et al.(2015)
pTH9158 		0.818 0.947
ces-1
M09518_2.00 		Caenorhabditis elegans
NWAATYNRATTW
WAATYNRATTWN		 Misc
Heinz et al.(2010)
cElegans-L1-CES1_modEncode 		0.818 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN22561 C2H2 ZF 121 143
CBN22561 C2H2 ZF 152 174
CBN22561 C2H2 ZF 178 200
CBN22561 C2H2 ZF 206 228
CBN22561 C2H2 ZF 234 255

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ces-1 Caenorhabditis elegans WBGene00000468 D 0.818
CRE29493 Caenorhabditis remanei CRE29493 I 0.808
CBG12499 Caenorhabditis briggsae CBG12499 I 0.762