CRE29493 (Caenorhabditis remanei)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CRE29493 T085085_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ces-1
M00608_2.00 		Caenorhabditis elegans
CCTGTTG
CAACAGG		 PBM
Narasimhan et al.(2015)
pTH9158 		0.818 0.991
ces-1
M09518_2.00 		Caenorhabditis elegans
NWAATYNRATTW
WAATYNRATTWN		 Misc
Heinz et al.(2010)
cElegans-L1-CES1_modEncode 		0.818 0.991
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE29493 C2H2 ZF 152 174
CRE29493 C2H2 ZF 183 205
CRE29493 C2H2 ZF 209 231
CRE29493 C2H2 ZF 237 259
CRE29493 C2H2 ZF 265 286

Links

Other C2H2 ZF family TFs
Other Caenorhabditis remanei TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ces-1 Caenorhabditis elegans WBGene00000468 D 0.818
CBN22561 Caenorhabditis brenneri CBN22561 I 0.808
CBG12499 Caenorhabditis briggsae CBG12499 I 0.762