CRE00505 (Caenorhabditis remanei)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CRE00505 T084957_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ref-2
M00621_2.00 		Caenorhabditis elegans
CMYRSNGNBH
DVNCNSYRKG		 PBM
Narasimhan et al.(2015)
pTH9089 		0.807 0.924
opa
M03668_2.00 		Drosophila melanogaster
BVCCCCCCRYNGHB
VDCNRYGGGGGGBV		 SELEX
Nitta et al.(2015)
opa_1 		0.757 0.750
opa
M05861_2.00 		Drosophila melanogaster
VCCCCCCRYNGNK
MNCNRYGGGGGGB		 SMiLE-seq
Isakova et al.(2017)
Opa 		0.757 0.750
opa
M06468_2.00 		Drosophila melanogaster
GMCCCCCCGCDG
CHGCGGGGGGKC		 B1H
Mathelier et al.(2014)
MA0456.1 		0.757 0.750
opa
M06062_2.00 		Drosophila melanogaster
GMCCCCCCRCDG
CHGYGGGGGGKC		 B1H
Zhu et al.(2011)
opa_NAR_FBgn0003002 		0.757 0.750
opa
M06063_2.00 		Drosophila melanogaster
MKVMMCCCCMCYR
YRGKGGGGKKBMK		 B1H
Zhu et al.(2011)
Opa_SANGER_5_FBgn0003002 		0.757 0.750
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE00505 C2H2 ZF 106 133
CRE00505 C2H2 ZF 139 161
CRE00505 C2H2 ZF 167 191
CRE00505 C2H2 ZF 197 221

Links

Other C2H2 ZF family TFs
Other Caenorhabditis remanei TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRIREDRAFT_60897 Trichoderma reesei TRIREDRAFT_60897 N
MGU_03399 Metarhizium guizhouense MGU_03399 N
NechaG92421 Fusarium solani NechaG92421 N
OCS_00747 Ophiocordyceps sinensis OCS_00747 N
OCS_04593 Ophiocordyceps sinensis OCS_04593 N
PFICI_03549 Pestalotiopsis fici PFICI_03549 N
PV09_03404 Verruconis gallopava PV09_03404 N
SAPIO_CDS4519 Scedosporium apiospermum SAPIO_CDS4519 N
SBOR_2961 Sclerotinia borealis SBOR_2961 N
TRIATDRAFT_293053 Trichoderma atroviride TRIATDRAFT_293053 N
MGG_09562 Magnaporthe oryzae MGG_09562 N
TRIVIDRAFT_74205 Trichoderma virens TRIVIDRAFT_74205 N
V499_02769 Pseudogymnoascus pannorum V499_02769 N
VDAG_09459 Verticillium dahliae VDAG_09459 N
VHEMI08999 Torrubiella hemipterigena VHEMI08999 N
X797_000968 Metarhizium robertsii X797_000968 N
X797_003516 Metarhizium robertsii X797_003516 N
fgenesh1_pm.sca_3_chr4_2_0000036 Nectria haematococca fgenesh1_pm.sca_3_chr4_2_0000036 N
NCU02386 Neurospora crassa NCU02386 N
estExt_Genewise1.C_100108 Cryphonectria parasitica estExt_Genewise1.C_100108 N
FPSE_05827 Fusarium pseudograminearum FPSE_05827 N
Bcin02g08310 Botrytis cinerea Bcin02g08310 N
CFIO01_08071 Colletotrichum fioriniae CFIO01_08071 N
CGGC5_3607 Colletotrichum gloeosporioides CGGC5_3607 N
CH063_08900 Colletotrichum higginsianum CH063_08900 N
Cob_05888 Colletotrichum orbiculare Cob_05888 N
CSUB01_01660 Colletotrichum sublineola CSUB01_01660 N
CTHT_0048430 Chaetomium thermophilum CTHT_0048430 N
FFUJ_13620 Fusarium fujikuroi FFUJ_13620 N
FGRRES_06382 Fusarium graminearum FGRRES_06382 N
ACRE_054570 Acremonium chrysogenum ACRE_054570 N
GGTG_05245 Gaeumannomyces graminis GGTG_05245 N
GLRG_06776 Colletotrichum graminicola GLRG_06776 N
GMDG_04399 Pseudogymnoascus destructans GMDG_04399 N
MAC_07589 Metarhizium acridum MAC_07589 N
MAJ_08773 Metarhizium majus MAJ_08773 N
MANI_028863 Metarhizium anisopliae MANI_028863 N
MAPG_03623 Magnaporthe poae MAPG_03623 N
MBR_08228 Metarhizium brunneum MBR_08228 N